Gene Swit_4607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4607 
Symbol 
ID5198793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5064205 
End bp5065377 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content72% 
IMG OID640584162 
ProductAcetyl-CoA acetyltransferase-like protein 
Protein accessionYP_001265083 
Protein GI148557501 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.864443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCTGC CGCGCGGCTA TGACGGGGTC GCGATCGCCT GTCCGGTCAC GGTCCGTTAT 
GCGCGGCACA GCGACCGCTC GGCGCATTGG CACATCGGCA CGGCGCTGCG CGAGCTGATC
GCGCAGGCGG GGATCGCCAA GGCGGAGGTC GACGGCCTCG CCGCTTCCTC CTTCACCCTC
GGCCCCGACA CCAGCATCGC GCTGACCGAG CATTTCGGCC TGTCGCCGCG CTGGCTCGAC
TGGATTCCAA CCGGCGGCGC GAGCGGGGTG ATGGCGCTGC GCCGTGCGGC ACGGGCGGTG
CAGGCCGGCG ACGCCTCGGT GGTCGCCTGC ATCGGCGGCG ACACGGCCGA TGCCGGCGCG
TTCGGCGATC TGGTGCGCAA TTTCAGCCGC TTCTCGCGCG AGGCGGTCTA TCCCTATGGC
GCGGCCGGCC CGAACGGCGT CTTCGCGCTG ATCACCGACC ATTATATGCG GACCCATGGC
GCCGAGCGCG CCGATTTCGG CCGGGTCGTC GTCGCCCAGC GCAGCCATGC CCGCGCCAAC
CCCAATGCGC TGCTCGGCGC CAAGCCGCTG ACGATCGACG ACTATCTCGC CGCGCCGCCG
GTCGCGACGC CGCTTCATCT GTTCGACTGC GTGATGCCGT GCGCCGGGGC CGAGGGCTTC
CTGGTGATGA CGGTCGAGCG CGCCCGCCGG CTGGGGCTGC CTTATGCGGT GATCCGCGGG
GCGATCGAGC GGCACGACGC CTATGCCGAC GACCCGATCG CCGAGCGCGG CGGCTGGGCG
ATGGACCGCG ACACGCTCTA CGCCCAGGCC GGCCTCGGCC CCGGCGACGT CGACTGCCTC
CAGGCCTATG ACGACTATCC GGTGATCGTC CTCCAGCAGA TCGAGGACCT CGGCTTCTGC
GCCAAGGGCG AGGGCGCGGC CTTCGTCCGC CGCCATGATC TCGGCGTCGG CGGCGACTTT
CCGGTCAACA GTTGCGGCGG CCAGCTCGGC TGCGGCCAGG CCGGGGCGGC GGGCGGCTTC
CTGCCGGTGG TCGAGGCGCT GCGCCAGGTG GTCCGCCGGC CGATCGGAGC GCAGCTGCCC
GATGCGCGGA TCGCGCTGGC GAGCGGTTAT GGCATGGTCA CCTTCGACCG CTGCCTCGCC
ACCGCCGCCG CGATCCTGGA GGGGCGGCCA TGA
 
Protein sequence
MTLPRGYDGV AIACPVTVRY ARHSDRSAHW HIGTALRELI AQAGIAKAEV DGLAASSFTL 
GPDTSIALTE HFGLSPRWLD WIPTGGASGV MALRRAARAV QAGDASVVAC IGGDTADAGA
FGDLVRNFSR FSREAVYPYG AAGPNGVFAL ITDHYMRTHG AERADFGRVV VAQRSHARAN
PNALLGAKPL TIDDYLAAPP VATPLHLFDC VMPCAGAEGF LVMTVERARR LGLPYAVIRG
AIERHDAYAD DPIAERGGWA MDRDTLYAQA GLGPGDVDCL QAYDDYPVIV LQQIEDLGFC
AKGEGAAFVR RHDLGVGGDF PVNSCGGQLG CGQAGAAGGF LPVVEALRQV VRRPIGAQLP
DARIALASGY GMVTFDRCLA TAAAILEGRP