| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4556 |
|---|
| Symbol | |
|---|
| ID | 5196775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 5014560 |
|---|
| End bp | 5015321 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640584109 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_001265032 |
|---|
| Protein GI | 148557450 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.197949 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACG ACAGCCAGCA TAATGACCGG ATCATCAGCC AGTTCACGCG ATGGGCGCAG
CCCTTCGCCG ATCTGCCGAT CCATTCCGCC GAGGACGGCA TGGCGCGCAC CCTCGCCGCG
GCCGTGATCG CGCCGACCGA TACGGTGCTC GACGTCGCCT GCGGCCCCGG CATCGTCGCC
TGCGCCGCCG CCGCCCACGC CGCGCACGTC ACCGGGATCG ACCTGACCCC GGCGATGATC
GAGCAGGCCC GGGCGCGCCA GGCGGCAGCG GGCCTCGCCA ATCTCGACTG GCGGACCGGC
GACGCGACCG ACCTGCCCTT CGCCGACGCC AGCTTCGACC GGGTCGTCAC CCGCTACAGC
TTCCACCATC TGCGCGAGCC GGGCCGGGCG CTGGCCGAGA TGCGGCGCGT CTGCCGCCCC
GGCGGCCGGA TCGTCGTGAT CGACGCGACC CCCGCGCCCG AATGCCAGGC CGCCTATGAC
CGGATGGAGA CGCTGCGCGA TCCGTCGCAC ACCAGCGCCT TGACGCTCGA CCAGCTGCGC
GGGCTGGGCC GGATCGCCGG ACTGGAGGAG GCGATCGTCG ACGGCTACCG GCTGGAGGCG
CTGCTCGCCA CGCTCGCCGA CGCCGACGAC ATGACCGCGC TCGACACGAT GTTCGACGCC
GACATCGCCA GCGGCGAGGA TCGCATCGGC GTGCAGGCCT GGCGCGGGGC GGACGGCGTC
CGCTTCCTCT TCCCGATCTC GATCGTCGCC TGGCGCCGCT GA
|
|---|
| Protein sequence | MNDDSQHNDR IISQFTRWAQ PFADLPIHSA EDGMARTLAA AVIAPTDTVL DVACGPGIVA
CAAAAHAAHV TGIDLTPAMI EQARARQAAA GLANLDWRTG DATDLPFADA SFDRVVTRYS
FHHLREPGRA LAEMRRVCRP GGRIVVIDAT PAPECQAAYD RMETLRDPSH TSALTLDQLR
GLGRIAGLEE AIVDGYRLEA LLATLADADD MTALDTMFDA DIASGEDRIG VQAWRGADGV
RFLFPISIVA WRR
|
|---|
| |