| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4550 |
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| Symbol | |
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| ID | 5199868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5004342 |
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| End bp | 5006153 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640584103 |
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| Product | ABC transporter related |
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| Protein accession | YP_001265026 |
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| Protein GI | 148557444 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.132908 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGATCG GGCCGATCGC CGATTTCGCC GGCTTCGTCC TGCGGCGCAG CGGAGGCCGG
GGGATGACGG CGCTCGTCCT GCTGCTGCTC GGCAGCCTGT CCGAAGGCGT CTCGATCCTG
CTGCTGATCC CCTTGCTCCA GTTCGCGGGC GGGGCGGGTG GCGGCGTGCC GATGGCGAGC
CTGCCGCTGG TCGGGCATCT GTTCGATCCG GCTACCCGGA TCACCCTCGT GCCGCTGCTC
GGCTGCTTCC TGGCCTTCGT CACGGCGCAG GCGGTCCTCA CCCGCTTCAA GGCGGTCCAT
GTCGCGCGGA TGATGCAGCT CTGCGTCGAC GCGATCCGGC TGCGGCTGTT CCGCGCGATC
GGCGCGGCGC GCTGGACCCG CGTCGCGGCG ACCCGCGCCG CCGATCTCCA GCAGGCGCTG
ACCGGCGATG TCGAGCGGGT CCGCGCCGCC GTCTACAACC TGCTGCTGCT GTTGCAGGCG
CTGGTCATGG TGGCGATCTA TGCGGTGCTC GCCGCGGCGA TTTCGCCGGT GATGACCTTG
TTCGCGGTCG GCGTCGGCGG CGTGGTGCTG CTCGCGCTCT ATCCGGTCCG TCGCCGGGCG
ACCCGCTTCG GCGAGACGCT CGGTGGCTCG CTGGCCGACC AGCAGCACAT GATCTCCGAA
TTCCTCGCCG GCATGAAGGT CGCCAAGGCG TTCAACGCCG AGGCGGGCTA TGCCGCGCGG
CTGGAGGCGA TGCTGCGCGA GGTGCGCGAC GAGATGCTCC GCTTCGCCCG CGCGACCGCC
AATGGCACGC TGCTGTTCCA GCTCGTCGGC GCGGTCGCGG CGGTCGGCTT CATCCATGTC
TCGGTTGCGG TGCTCCACCT GCCGCTGGCG CGGATCGCGG TGCTGCTGTT CCTGTTCGTC
CGGATCGGAC CGCGCTTCAA CATGATCCAG GATTCGCTCC AGCAATTGCT GTCGCACCTG
CCCGCCTGGC AGGATTCGCG GCGGCTGATC GCGCGGTTCG AGGCCGATCG CGAGAAGGAC
GAGGGCGCGG ATCTCGCCGC CGTCCCGCCG TTGCGGCACG AGATAAGGTT CGACCGGGTC
GGCATGGATT ACGGCGCGGG CGGCCTGCCG GTGCTCCGCG ACGTCAGCTT CGCCATTCCC
GCCGGCCGGA TCACCGCGAT CGCGGGACCA TCCGGCAGCG GCAAGACGAC CTTGGCCGAC
ATGGTGATGG GACTGGTCGA GCCGAGCGCG GGCAGGGTGC TGCTCGACGG CCGGCCGCTC
GACGGCTGCG GCCTGCGCGC CTGGCGCGAT CGGGTCGCCT ATGTCCCGCA GGACGGCTTC
CTGCTCAACG ACAGCATCGC CGCCAACCTC GCCGTCGCCG CGCCGGGCGC CGATGCGGCG
CGCATGTGGG CGGCGCTGGA GGCGAGCGGC GCGGCCGGCT TCGTCGCGCG CATGCCCGCC
GGGCTCGACA CCGTCGTCGC CGATCGCGGC ATCCGCCTGT CGGGCGGCGA GCGCCAGCGC
ATCGCGCTCG CCCGCGCGCT GCTGCGCCGT CCCGACCTGC TGATCCTCGA CGAGGCGACC
AGCGCGCTCG ACGAGGATAA TGAGACGCTG ATCATCCGCT CGCTCGAACG GCTGCGCGGG
ACGATGGCGA TCCTCGTCAT CGCCCACCGC GCCCGGATCA CCGCGATCGC CGACCAGGTC
GTCCAGATCG AACAGGGGCG CGTGCGCGTC TGCGGCCCCG TAAACCTCGA CGGCGTCGTC
CCTTTCCCCC CGCAGCGGAC CGGCCATGCG CCGGCCGCCG TCGTCACCCG GCCCGCGTCG
CATGGCGAGT GA
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| Protein sequence | MRIGPIADFA GFVLRRSGGR GMTALVLLLL GSLSEGVSIL LLIPLLQFAG GAGGGVPMAS
LPLVGHLFDP ATRITLVPLL GCFLAFVTAQ AVLTRFKAVH VARMMQLCVD AIRLRLFRAI
GAARWTRVAA TRAADLQQAL TGDVERVRAA VYNLLLLLQA LVMVAIYAVL AAAISPVMTL
FAVGVGGVVL LALYPVRRRA TRFGETLGGS LADQQHMISE FLAGMKVAKA FNAEAGYAAR
LEAMLREVRD EMLRFARATA NGTLLFQLVG AVAAVGFIHV SVAVLHLPLA RIAVLLFLFV
RIGPRFNMIQ DSLQQLLSHL PAWQDSRRLI ARFEADREKD EGADLAAVPP LRHEIRFDRV
GMDYGAGGLP VLRDVSFAIP AGRITAIAGP SGSGKTTLAD MVMGLVEPSA GRVLLDGRPL
DGCGLRAWRD RVAYVPQDGF LLNDSIAANL AVAAPGADAA RMWAALEASG AAGFVARMPA
GLDTVVADRG IRLSGGERQR IALARALLRR PDLLILDEAT SALDEDNETL IIRSLERLRG
TMAILVIAHR ARITAIADQV VQIEQGRVRV CGPVNLDGVV PFPPQRTGHA PAAVVTRPAS
HGE
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