Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4534 |
Symbol | |
ID | 5198592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4985960 |
End bp | 4987315 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640584087 |
Product | UDP-glucose 6-dehydrogenase |
Protein accession | YP_001265010 |
Protein GI | 148557428 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0608813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGA CGATCATCGG TACGGGCTAT GTTGGAATCG TCTCGGCAGC GTGCTTCTCC GAATTCGGCC ATGTCGTGAC CTGCGTCGAC ATCGATGCCA ACCGGATCGC CGAATATAAT GCCGGCCACG TCCCGATCTT CGAGCCGGGG CTGGGCGACC TGATCAACCG CAACGTGAAG GGCGACCGCC TGTCCTTCAC CACCGACCTG GCCGAAGGCG TCAAGGATGC GGAAGCGGTG TTCATCGCGG TCGGCACCCC GTCGCGGCGC GGCGACGGCC ATGCCGACCT GAGCTACGTC TTCGCCGCCG TCCGCGACCT CGCCAAGCTG GTCCCCGAAG GCTGCGTCAT CGTCAACAAG TCGACCGTGC CGGTCGGCAC CGCGAGCGAG GTGGAGGCGA TCCTCGCCGA GGTCGTGCCG GGCAAGACCG TGCATGTCGT CTCCAATCCC GAATTCCTGC GCGAGGGATC GGCGATCGAG GATTTCCTGC GCCCCGACCG CGTCGTCGTC GGCGTGTCGA GCGAGGCCGC GCGCAAGCTG ATGGCCGAGA TCTACCGCCC GCTGTTCCTG CGCGAGACGC CGATCCTGTT CACCGACTGC CGCACCGCGG AGGTGATCAA ATATGCCGCC AACGCCTTCC TGTCGGTGAA GATCGCCTTC ATCAACGAGA TCGCCGACCT GTGCGAGACG GTCGGCGCCG ACGTGAAGGG CGTCGCCAAG GGGATCGGCA TGGATCGCCG CATCGGCAAC AAATTCCTGA ACCCCGGCCC CGGCTATGGC GGCTCCTGCT TCCCGAAGGA CACGCTGGCG CTGCTGCGCA CCGCCGAGCA GGCCAACGCC ACGCTGCGCA TCGTCCAGGC GACCGTCGAC GCCAATGACG AGCGCAAGAA GGAGATGGCC CGCCGCGTCA TCGCCGCCTG CGGCGGCAGC GTCGAGGGCA AGACGATCGG CATCCTCGGC CTGACCTTCA AGCCGAACAC CGACGACATG CGCGACGCGC CCAGCCTGGT CGTCATCCCC GAGTTGCAGA AGGCGGGCGC CAAGGTCCGC GCCTATGATC CGGAAGGCCG CCCCTCCGCC GAGAAGATGC TGCCGGGGGT CGAGTTCGTC AGCAACGCCT ATCAGGCGGT CGAGGACGCC GCCGCGGTGG TGTTGCTGAC CGAGTGGAAC GAGTTCCGCG CGCTCAACCT CGATCGGGTG CGCGGCCTGC TCCGCAACCC GCTCTTCATC GACCTGCGCA ACGTCTACGA GCCCGAGGAC ATGGCGCGCG CCGGCTTCCA CTATATCTCG ATCGGCCGCA GCCCGACTGG GCCGGCCGAG GCCGCGACGC GGCCCGCCGC CGTCACCGCC GCCTGA
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Protein sequence | MRLTIIGTGY VGIVSAACFS EFGHVVTCVD IDANRIAEYN AGHVPIFEPG LGDLINRNVK GDRLSFTTDL AEGVKDAEAV FIAVGTPSRR GDGHADLSYV FAAVRDLAKL VPEGCVIVNK STVPVGTASE VEAILAEVVP GKTVHVVSNP EFLREGSAIE DFLRPDRVVV GVSSEAARKL MAEIYRPLFL RETPILFTDC RTAEVIKYAA NAFLSVKIAF INEIADLCET VGADVKGVAK GIGMDRRIGN KFLNPGPGYG GSCFPKDTLA LLRTAEQANA TLRIVQATVD ANDERKKEMA RRVIAACGGS VEGKTIGILG LTFKPNTDDM RDAPSLVVIP ELQKAGAKVR AYDPEGRPSA EKMLPGVEFV SNAYQAVEDA AAVVLLTEWN EFRALNLDRV RGLLRNPLFI DLRNVYEPED MARAGFHYIS IGRSPTGPAE AATRPAAVTA A
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