| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4531 |
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| Symbol | |
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| ID | 5200091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4982518 |
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| End bp | 4983144 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640584084 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001265007 |
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| Protein GI | 148557425 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCTT TCGTGACATT TTCCCTCCGC CGCGCCGCGT CCCTGGCGCT CGCGCTGCTC
CTCGTCCTTG GGCTCGGACT GGCGCATCCC GCCGCCGCGC AGGAGGCCCA GGCGCCCGCG
CCGCAGGGCT CGGCGGCATC GGTGCCGCTG GGAACCACCC TCGCGCCCGG CTATGTGCTG
GGCACCGGCG ACAAGCTGCG GATCAGCGTG TTCGGCGAGC CCAAGCTCGA CGGCGAATAT
GTCGTCAGCA GCACGGGCAT CGTCTCCTTC CCGCTGATCG GCAACGTCCC CGCCAGCGGC
CAGACGGTCG AGGCATTGCA GGAAAGCATC CGCTCGAAGC TCGCCGCCGG CTATCTGAAG
GACCCGCGGG TGAGCACCGA GGTGCTCAAC TATCGCCCCT TCTACATCCT CGGCGAGATC
AACAAGCCGG GCGAATATCC CTTCGTCAAC GGCATCACCG TGCAGCAGGC GGTGGCGATG
GCGGGCGGCT TCAGCTACCG CGCGAACACG AAGCGCGTGT TCATCAAGCG CGCGCTCGAA
ACCGCCGAGC GGCCGGTCCA GATCAAGGGC AAGGCGGTGC TGCTGATGCC CGGCGACACG
ATCCGGGTCG GCGAACGCTT CTTCTAG
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| Protein sequence | MTAFVTFSLR RAASLALALL LVLGLGLAHP AAAQEAQAPA PQGSAASVPL GTTLAPGYVL
GTGDKLRISV FGEPKLDGEY VVSSTGIVSF PLIGNVPASG QTVEALQESI RSKLAAGYLK
DPRVSTEVLN YRPFYILGEI NKPGEYPFVN GITVQQAVAM AGGFSYRANT KRVFIKRALE
TAERPVQIKG KAVLLMPGDT IRVGERFF
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