| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4527 |
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| Symbol | |
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| ID | 5199506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4976162 |
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| End bp | 4977706 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640584080 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001265003 |
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| Protein GI | 148557421 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0212681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCG CGTCGGAAGC GGTGTCTTCC GCAGATAATG AAGATCTCAG GCGCCGGGCT
GTTCATGGAA CGGTTGCGAT AGGGCTCGCG CAAGTTGTAA AATTTGCAAC ACAATTACTG
TCCGTCGTGA TTTTGGCACG GCTCCTCGCA CCTACGGACT TTGGTTTGTT CGCGATGGTC
ATGCCGTTGG CCGCTTTCGT CATGATGGTG CAGGACATCG GCCTGTCGCA GGCGGTCGTC
GCCTCGCCGC ATCTCACCCC GGCGCAGACC AGCGCGATGT TCTGGATCAA CGCGGCGCTG
TCGCTGGCGC TGGCGCTGCT GTTCGCGATA GCGGCGCCAC TGATCGCCGC CTTCTTCGGC
GAGCCGCGGC TGGTGGCGCC CGCGCTCGCG CTGGCCGGAT CGGTGCTGGT GTCGGGGCTC
GCCACCCAGC ATTTCGCCCA TCTCACCAAG ACGCTGCGAT TCGGGACGAT CGCCGTCATC
GACATCGCCT CGACCCTGCT CGGCTTCGCC GCGGCGGTCG CGATCGCCTG GTTCGCGCCC
GGCATCTGGG CGCTCGTCGC CTCGGTGCTG GTCGGCATGG GCGTCGGGCT GGTCGGCGCC
TGGGCCACCG CCCGCTGGCT GCCGGGGCGG CCGGCGCGGT TCGCCGAGGT GCGCGAACTG
CTGCGCCTCG GCGCGGGCCT GTCGACCTTC ACCCTGTCCA ATTTCTTCGC CCGCAATCTC
GACAATGTGA TGATCGGGCG CTGGGCGGGG GCGGTGCAGC TCGGCTTCTA CGACCGCGCC
TACAAGCTGC TGCTGTTCCC TCTGCAACAG ATCAACAACC CGATCGGCCG GGTGATGGTG
CCGGTGCTGT CGCGGCTCGC CGACGAGCCG CACCGCTACC GCCACGCCTA TCGGCGGACG
ATCCGGCTGA TGCTGATGGT CACGCTGCCG GGCGTCGCGT TCATGTTGGT CTTCGCCGCG
CCGCTGATCG ACGCGCTGAT GGGGCCGCGC TGGCGGCCGG CGGCGGCGAT CTTCACCTGG
CTCGCGGTCG CTGCGCTGCA CCAGCCGATG AGCGCCACCT TCGGCTGGCT GTTCATCAGC
CAGCGGCGCG GCGGCGAGTT CGGGCGCTGG GGCCTGTTCA ATATGGTCAC CAGCGTTCTG
GCCTTCGCGA TCGGCCTGCC CTGGGGCGCG ATCGGCGTCG CCGCCGCCTA TGCGCTCAGC
GACGTGCTGA TCCGCATGCC GGTGCTGTGG TGGTGGGTCG GCCGGTCGGG CCCGGTCCGC
CATCGCGACC TGCTGTCGAT CGTCTGGCCG TTCGCGATCG CGCTGGCCGG AACCTTGGCG
GGGCTGGCCG GGCTGCGCCT GTGGGGTGGC GCGACCGGGC TGGCCGGGCT GGTCCTCGCC
GCCGGCCTCG CCTTCGGAAG CTTCGCCGTC CTGCTCGCCT TCACCGCGCC CGGCCGGGAA
ACGCTGGCCG AGGCGGCGGC GCTGGTCGGG AGCCGGCTGG GCCGGTTCGG ATCGCCCGAG
CGGCGGGACA GGGGAAGCGG GCGACCGGCA ATCGAATCAC GTTGA
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| Protein sequence | MKAASEAVSS ADNEDLRRRA VHGTVAIGLA QVVKFATQLL SVVILARLLA PTDFGLFAMV
MPLAAFVMMV QDIGLSQAVV ASPHLTPAQT SAMFWINAAL SLALALLFAI AAPLIAAFFG
EPRLVAPALA LAGSVLVSGL ATQHFAHLTK TLRFGTIAVI DIASTLLGFA AAVAIAWFAP
GIWALVASVL VGMGVGLVGA WATARWLPGR PARFAEVREL LRLGAGLSTF TLSNFFARNL
DNVMIGRWAG AVQLGFYDRA YKLLLFPLQQ INNPIGRVMV PVLSRLADEP HRYRHAYRRT
IRLMLMVTLP GVAFMLVFAA PLIDALMGPR WRPAAAIFTW LAVAALHQPM SATFGWLFIS
QRRGGEFGRW GLFNMVTSVL AFAIGLPWGA IGVAAAYALS DVLIRMPVLW WWVGRSGPVR
HRDLLSIVWP FAIALAGTLA GLAGLRLWGG ATGLAGLVLA AGLAFGSFAV LLAFTAPGRE
TLAEAAALVG SRLGRFGSPE RRDRGSGRPA IESR
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