| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4408 |
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| Symbol | |
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| ID | 5200355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4857002 |
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| End bp | 4858474 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583960 |
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| Product | CHAD domain-containing protein |
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| Protein accession | YP_001264884 |
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| Protein GI | 148557302 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3025] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.38693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.881049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAGC CCGTCGAAAT TGAGCTGAAG CTCGACTTTG ATCCCGCCGA CCGGGATCGC
CTCGCGGCCT GCCCCCTGTT CGGCCCCGAA CCCGCGGCGA CGCGGCGGCT CGCGGCCACC
TATTTCGACA CGCCCGGCTT CCATCTCGAC AAGGCGGGCT ATGCGCTCCG CATCCGCAGG
GACGGCGGCA AGCGCATCCA GACGGTGAAG GCAGCGTCGG GCGAGACGGC GGGCCTGTTC
GTGCGCGGCG AATGGGAACG CCGCGTGACC GGCGACAGGC CCGTGCTCGA CGAGGCGTCG
GGCCCGCTCC TGCAGCTCTT CGATGCGGAG TTGCTCGCGC GGATCGAACC GGTCTTCACC
ACCGCGATCG ACCGCGCCGA GGGACCGATC GATCGCCCGG ACGGCAGCCG CATCGACTAT
GCGATCGACC TCGGCGAGGT GCGCGCGGGA ACGCGCGGCA GCGCGGTGTG CGAGCTGGAG
CTGGAGCTGA AGCGCGGGAC ACCGCAGGCG CTGTTCGATC TCGCCCGCAC CCTCAACGAA
CTGGTCCCGC TGCGGCTCGG CGTGTCGACC AAGTCCGAGC GCGGCTATGC GCTGGCCGAC
AAGGCGTTCA CCGCCGCCGT CAAGGCCGAG CCGCTGAAGC TCGACCGGGC GATGGCCGCC
GGCGACGCCT TCGCCGCGAT CGCCGCTTCC TGCCTGCGCC AATATCGCCG CAACGAGGAC
CTGCTGCTGC TGTCGGGCGG GGTCGAGCAA TTGCACCAGG CCCGGGTCGC GCTGCGCCGC
CTGCGGACCG CCTACTGGCT GTTCGGCCCC TTGTTCGAAG GCGACGAGCG CGCCGCGGCG
TTCGCGTCGG AGCTGCGCTG GCTCGCCGCG GAACTCGGCG GGATCCGCGA CATCGACGTG
CTGGTGCCGC GCCTCGAGGA GCCTTCGCGC GCGGCCCTGT TCGCGATCCG CGAGAACCGC
TTCGGCCATC TCCGCACCCT GCTCGACAGC GGCCGGGTCC GGCTGCTGCC GATCGAGCTG
GCCGAATGGC TGGCGCTCGG CCGGTGGCGG ACCGACCCCG CCGATCCCTA TCTGCGCGAC
CGCTACGTCC GCGCCTTCGC CAGCGACCGG CTCGAACGGC TACGCAAGCG GATCAAGCGC
GCGGGCAAGG ACCTCGCCGA TACCGACGAC GAGCATCGCC ACGCCGTCCG CAAGACCGCC
AAGAAGCTCC GCTACGCGAG CGAATTCTTC GTGTCGCTCT ATCCTGGACG CAAGGCGCGC
CGCCGGATGG AGCGTTTCCT TGACCGACTG GAAGCGTTGC AGGACAAGCT GGGGCAACTC
AACGACATCG CCGCCGCCCC CGAGCTGTTC GCCCGGCTGG GCGTGGAGGC GGCCCTGCCC
ATGCCGGGCA AGAAGGAACG CAAGCGCCTG CTCGACGATG CCGAGGATTG TTTCGAAACC
CTCATCGACA CCAAGCGCTT CTGGCGCGAT TGA
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| Protein sequence | MDEPVEIELK LDFDPADRDR LAACPLFGPE PAATRRLAAT YFDTPGFHLD KAGYALRIRR
DGGKRIQTVK AASGETAGLF VRGEWERRVT GDRPVLDEAS GPLLQLFDAE LLARIEPVFT
TAIDRAEGPI DRPDGSRIDY AIDLGEVRAG TRGSAVCELE LELKRGTPQA LFDLARTLNE
LVPLRLGVST KSERGYALAD KAFTAAVKAE PLKLDRAMAA GDAFAAIAAS CLRQYRRNED
LLLLSGGVEQ LHQARVALRR LRTAYWLFGP LFEGDERAAA FASELRWLAA ELGGIRDIDV
LVPRLEEPSR AALFAIRENR FGHLRTLLDS GRVRLLPIEL AEWLALGRWR TDPADPYLRD
RYVRAFASDR LERLRKRIKR AGKDLADTDD EHRHAVRKTA KKLRYASEFF VSLYPGRKAR
RRMERFLDRL EALQDKLGQL NDIAAAPELF ARLGVEAALP MPGKKERKRL LDDAEDCFET
LIDTKRFWRD
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