| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4392 |
|---|
| Symbol | |
|---|
| ID | 5197740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 4843474 |
|---|
| End bp | 4845288 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640583944 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001264868 |
|---|
| Protein GI | 148557286 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGCC GCACCTTCAT CGCCTCGGCC GGCACCGCCG CCCTAATCGC CGGATTGCGA
CCCGCGCTGG CCCAGGCGCC GGCCACCGGC GGGGCCGACG CGAGGCTCAA TGCCTTGTTC
GACCGGATCT TCAACGATAC GCTCGACACT TCGCCCCAAT TCTGCACCGC GCTTGGCTAT
GACAAGGGCG ACCGGGCCGC CGCCAAGAGC AAGCTCGACG ACAATAGCGA CGCGGGCATG
CGCGACGATC TCGCCCACAC CAGGAAATGG CTGGCCGAAG TGGAGGCCTT CCCGACCGCG
GGGCTGTCGG AGGCCGGCGC GCTCAATCGC GAGATCGTCG GCTATTCGCT GCGCAACCAG
ACCGTCGCGC CGGAGCGGTT CGGGATCGAC AGCGTGATCC GGCCCTATCG CATCTTCCAG
CAGGGCGGCG CCTATTTCCA GCTTCCCGAT TTCCTGAACG ACGCGCATGT GATCGCCGAC
AAGGCGGATT GCGACGCCTA TCTGGCGCGG CTCGACGCGC TGGGCGGGGT GCTCGACACC
GACACCACCG TGCAGAAGGA ACGGTCGTCG CGCGGCATCA CCGCGCCGGA CTTCGCGATC
GACCTGACGA TCGGCCAGCT CGAGAAGCTG CGCGGGGCGC CCGCCGCCGA CAGCACGCTG
GTCCAATCGC TGGCGCGGCG CGCGAAGGAG AAGGGCATCG CGGGCGACTT CGCCGGCCCG
GCCGAGAAGA TCGTCAGCGA CAAGGTCTAT CCTGCGCTCG ACCGGCAGAT CGCGCTGATG
AAGCAGCTTC GCGCCACCAC CGCGCCGGGC TCGGGCGTCT GGCGGCTGCG TGACGGCGAG
GCGATCTACG CGGCGGCGCT GGCCCAGGCG ACCACCACCA ATTTCTCGCC CGAGGAGGTC
CACAAGATGG GCCTGGAGCA GGTCGCCGAG ATCAGCGCCG AGCTCGATGC GATCCTGAAG
GGCCAGGGGC TGACCAAGGG CGCGATCGGC GAGCGGCTGA CCGCGCTCAA CAAGGACCCC
AGGCAGCTCT ATCCCGACAG CGCCGAAGGG CGCGCCGCGC TGATCGCCTC GCTCAACGAA
GGGGTGAAGG CGATGCATGC GAAGCTGCCG CGCTATTTCT CGCACGTGCC GGCCGCGCCG
CTGGAGATCC GGGCGGTGCC GGTGGAGATC CAGGACGGGG CGTCGAACGG CTATTACAAG
CGCGCGACGC TCGACGGGTC GCGGCCGGCC ATCTACTTCA TCAACCTGAA GGACGTCGGC
GACTGGCCCA AATATACGTT GCCGGCGCTG ACCTTCCACG AAGGCGTGCC GGGCCATCAT
CTCCAGATCA GCCTCGCGCA GGAGTCGAAG GACATCCCGA CGCTGCGCAA GATCGGCTTC
TTCGGCGCCT ATAGCGAGGG CTGGGCGCTC TACGCGGAAC AACTCGCCGA CGAACTCGGG
AGCTATGCCG ATCCGCTCGA ACGTGCCGGC TATCTCCAGT CCTTCCTGTT CCGCGCGGCG
CGGCTGGTGG TCGACACCGG CATCCACACC CAGCGCTGGG AGCGCGACAA GGCGACCGCC
TATATGGTCG GCACCACCGG CTTCGCGCAG CCGCGATCGC AGCGCGAGGT GGAGCGCTAT
TGCACCCAGC CGGGGCAGGC CTGTTCGTAC AAGGTCGGTC ACATGGCCTG GGTGCGCGCC
CGCGCCAATG CGGAGAAGGC GCTCGGCGGC CGCTTCGACA TCCGCCGGTT CCACGACGTG
CTCAAGAGTG GGGCGATGCC GTTGACCGTT ATGGAGCGGC TGGTCGAGGC GCGGACCAAG
GCGCTGCTCG CCTGA
|
|---|
| Protein sequence | MDRRTFIASA GTAALIAGLR PALAQAPATG GADARLNALF DRIFNDTLDT SPQFCTALGY
DKGDRAAAKS KLDDNSDAGM RDDLAHTRKW LAEVEAFPTA GLSEAGALNR EIVGYSLRNQ
TVAPERFGID SVIRPYRIFQ QGGAYFQLPD FLNDAHVIAD KADCDAYLAR LDALGGVLDT
DTTVQKERSS RGITAPDFAI DLTIGQLEKL RGAPAADSTL VQSLARRAKE KGIAGDFAGP
AEKIVSDKVY PALDRQIALM KQLRATTAPG SGVWRLRDGE AIYAAALAQA TTTNFSPEEV
HKMGLEQVAE ISAELDAILK GQGLTKGAIG ERLTALNKDP RQLYPDSAEG RAALIASLNE
GVKAMHAKLP RYFSHVPAAP LEIRAVPVEI QDGASNGYYK RATLDGSRPA IYFINLKDVG
DWPKYTLPAL TFHEGVPGHH LQISLAQESK DIPTLRKIGF FGAYSEGWAL YAEQLADELG
SYADPLERAG YLQSFLFRAA RLVVDTGIHT QRWERDKATA YMVGTTGFAQ PRSQREVERY
CTQPGQACSY KVGHMAWVRA RANAEKALGG RFDIRRFHDV LKSGAMPLTV MERLVEARTK
ALLA
|
|---|
| |