| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4372 |
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| Symbol | |
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| ID | 5198528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4826739 |
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| End bp | 4828358 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640583924 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001264848 |
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| Protein GI | 148557266 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATT CGCATGTCAG GGGAGCCGAT TTCCCGCCCC TGCTGGACAT GACCATCGGC
GAACTGCTCG AAGCCACCGC GACCAGGCTG CCCGAGGCGA CGGCGCTGAT CGTCCGCCAC
CAGGGCATAA GATGGAGCTA TGCCGAACTG CTCGCGCGGG TCGATGATCT CGCGCGCGGT
TTCCTTGGCG CGGGGCTGAA GCCCGGCGAC CGGATCGGCA TCTGGGCGCC CAATTGCGTC
GAATGGGTGC TGGTCCAGTT CGCGGCCGCG CGCGCCGGAC TGGTGCTGGT CAACATCAAC
CCGGCCTATC GCGCCGGCGA GATGGCGCGC GCGCTACAGA TGGTCGGCTG CGCGGCGCTG
GTGCTCGCCC GGTCGTTCAA GTCGAGCGAC TATGTCGCGA TGCTCGCCGA GGTCCGTGGC
GAACTGCCTG AGCTGCGGCT CGCCTTCTCG ATCGGGGAAG GCGAGCATCC GGGATGCCGG
CCGCTCGCCT CGGTGATGGG CGGCGACGCG CCGCTGCCGC GCGACGTCCG GCCCGACGAC
CCCACCAACA TCCAGTTCAC CAGCGGCACC ACCGGCCTGC CCAAGGGCGC CACGCTCTCC
CACCGCAACA TCGTCAACAA CGGCTATATG GTGGGCCATC GCATCGGCCT GTCGTCGGCC
GACACGCTCT GCATTCCGGT GCCGCTCTAC CATTGCTTCG GCATGGTGAT GGGCAACCTC
GCCTGCGTCG CGCACGGCGC CACCATGTGC TTCCCCGGCG AGGGCTTCGA TCCGGGGAGC
ACCCTCGAAG CGGTGGCGGC CGAGGGGTGC ACCGCGCTCT ACGGGGTGCC GACGATGTTC
GTCGCGATGC TCGAGTATCC CGATTTCGAC CGCCATGACC TCGGCACGCT GCGCACCGGC
ATCATGGCCG GGTCGCTCTG CCCGATCTCG GTGATGCGCG CGGTGCTCGA CCGGATGAAC
ATGCGCGAGG TGACGATCGC CTATGGCATG ACCGAGACGA GCCCGGTCAG CTTCCAGTCG
GCGATGGACG ACGCCATCGA GCTGCGCGTC TCGACGGTCG GGCAGGTGCA GCCGCACCTC
GAGGCGAAGG TGGTCGATGC CGACGGGAAG GTCGTCCCGC TGGGCGAGCC GGGCGAGCTG
TGCACGCGCG GCTATTCGGT GATGCTCGGC TATTGGGGCG ACCCGGAGAA GACCGCCGAC
GTGATCGACG CCGAGGGCTG GATGCACACC GGCGACCTGG CGACGCTGGA CGAGCAGGGC
TATGGCCGGA TCGTCGGCCG CATCAAGGAC ATGATCATCC GCGGCGGCGA GAATATCTAC
CCGCGCGAGA TCGAGGAGCA TCTGCTCACC CATCCCGACA TCGTCGACGC GCAGATCTTC
GGCGTGCCCG ACGCGAAGTT CGGCGAGGAG GTCTGCGCCT GGGTGATCTC GCGCAGCGGC
GCGTTGTCGG TGGAGGCGGT GATCGCGCAC TGCCGCGACC GGATCGCGCA TTACAAGGTG
CCGCGCCATG TCCGGCTGGT CGAGCAGTTC CCGCTGACCG TCACCGGCAA GGTACAGAAA
TTCGCGATGC GCGAGATCAT GGTGGCCGAA CTGTCGGTCG ATGTCGATGC GCCGGCCTGA
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| Protein sequence | MTDSHVRGAD FPPLLDMTIG ELLEATATRL PEATALIVRH QGIRWSYAEL LARVDDLARG
FLGAGLKPGD RIGIWAPNCV EWVLVQFAAA RAGLVLVNIN PAYRAGEMAR ALQMVGCAAL
VLARSFKSSD YVAMLAEVRG ELPELRLAFS IGEGEHPGCR PLASVMGGDA PLPRDVRPDD
PTNIQFTSGT TGLPKGATLS HRNIVNNGYM VGHRIGLSSA DTLCIPVPLY HCFGMVMGNL
ACVAHGATMC FPGEGFDPGS TLEAVAAEGC TALYGVPTMF VAMLEYPDFD RHDLGTLRTG
IMAGSLCPIS VMRAVLDRMN MREVTIAYGM TETSPVSFQS AMDDAIELRV STVGQVQPHL
EAKVVDADGK VVPLGEPGEL CTRGYSVMLG YWGDPEKTAD VIDAEGWMHT GDLATLDEQG
YGRIVGRIKD MIIRGGENIY PREIEEHLLT HPDIVDAQIF GVPDAKFGEE VCAWVISRSG
ALSVEAVIAH CRDRIAHYKV PRHVRLVEQF PLTVTGKVQK FAMREIMVAE LSVDVDAPA
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