| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4350 |
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| Symbol | |
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| ID | 5196845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4800488 |
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| End bp | 4802719 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640583904 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001264828 |
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| Protein GI | 148557246 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.425667 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCAAT CGCAGCTTCG CAGCCTGTCG CAGGCCAGCG GGAAGGCCCT GGCCGCCGCG
CTGATGCTGA CGGGCGTCCA TGGCGCGGCG CTGGCGCAGG ACGGCGGCGC GACCGCCGAG
GCGGAGGCCC CGGCCTATGG CGACATCGTC GTCACCGCGC AGAAGCGCGA GCAGAATATC
CAGAAGGTCG GCGTCGCGAT CAGCGCGCTC GGCAAGCAGG GCCTGGCCGA TCTCGGCCGG
CAGGACATCT CCGCGCTGGC GACCAAGCTC CCGAGCGTGC AGGTGCTGGC CTACAGCCCG
ACCCTGACCG TCTTCAACAT CCGCGGCGTG TCGCAGAACG ACTTCGCCGA CTCGCAGGAG
GCGCCGATCG CCTTCTATAA CGACGAGGTC TATGTCAGCG CGCTCGGCGC GATCAGCGGC
CAGATGTTCG ACCTCGAGCG CGTCGAGATG CTGCGCGGGC CGCAGGGCAC GCTGTTCGGG
CGCAACGCCA CCGGCGGCCT GATCCAGGTC GTGTCGGCCA AGCCGACCCG CGACCTGACC
GGCTTCGGCA CCGTCACCGT CGGCAGCTAC GGCCAGGTCG CGACCGAGGG CGCGATCAGC
GGCCCGCTGA GCGACACGCT GCGCGCCCGC CTGTCCTTCT CCACCAACCA TCATGGCGGC
TACATCGACA ACAGCATCGG CAAGGACCTC GGCAATTCGA AGTTCTACGG CGGCCGCTTC
CAGCTTGCCG GCGACGTCGG CGAGGGCGGC GAGTTCACGC TGAAGCTGCA GGGCCTGCGC
AACGACAAGG AGCGGACCGG CGGCCTTTAT TCGCACCGCA CCGCGATCGC CAATGCCGAC
GGCCTGGGCG AATATGTCGG CCGGAACGAC AATCCGTTCG GCACCTGCGC CGGCTGCGAC
ATGTTCGGCT ATGTCCAGGC GGGCAACGAC CCGTTCAAGG TCGCCTTCAA CGGCCCAAAC
AATTTCAGCC GCAGCTATTG GAGCGCGTCG CTGCGCTATG TGCAGGACCT GGGCGGCGTC
ACGCTGACCT CGATCAGCGA CTATCAGTAT CTCCGGAAGC GCTACGGCGA GGACGCGGAC
ATGTCGCCCG CCAGCACCTT CGCCTATTCG ACCAGCCAGA ACCTCGACCA ATATTCGCAG
GAACTGCGGC TGTCGAACAG CAGCGACCGC GCCACCTGGG TGGTCGGCGG CTATGCGATC
AAGATCGTCA GCAAGAACGG CTACAACACC GATCTGACCG GCAGCCTGGG CCTCAGCGAG
ATCTATGGCG GCACGCTCAA GACGACCTCG TTCGCCGGCT TCGGCCAGCT CGAATACAAC
CTGACCGACC AGGTCGCCCT GATCGGCGGC CTGCGCTATT CGGCCGACCG CAAGACGATC
GACTTCACCC ATGCCGAGAA CGGCGTGACC GACTTCACCT TCGACCGGGC CAGCGTCGGC
AAGCTCGCGC GGCAGAAGTT CAACGACTGG TCGGGCAAGG CCGGCATCAA CTTCAAGCCG
AACGAGGACA CGCTGATCTA TGCCAGCGTC AATCGCGGCA TCAAGGGCGG CGGCTTCGGC
ACCCCGGCGT TCAACCCCGG CGACCTGACC ACCATCCCGT TCAAGGAAGA GGTGCTGACC
GACTATGAGG GCGGCGTGAA GCTGACCCTG TTCGATCGCA CGACCCACCT GAACCTGTCG
GCCTTCTACT ACGACTATAA GGACTATCAG GCGTTCGAGC TGGTCGACCT GGCGCTCGCG
GTCCGCAACA AGGACGCGAC GATCAAGGGC GTCGAGGCCG AGTTCAACAC CCGTCCGGTC
GACGGCCTCT ACCTCCAGAC CTTCGCCACC TATCTCGACA GCAAGGTGAA GGGCGTGATC
CTGCCGGGCG GCCGCGTCGC CAATACCCGC ATGCCGCAGG CGCCGAAGTG GAGCATCGGC
TGGCTGGTCC GCTACGAGCT CGATGCGGGC CCCGGCCGGC TCGCGCTCCA GACCGACTGG
AAATATGACA GCGCGCAATA TCTCTCGACC TTCAACGCGC CGGTCGATCG CCAGCCGGGC
CGGGTCGTCG GCAATGCCCG CGTCACCTAT GGCTTCGGCG ACGGCAAGTG GGAGGTTGCG
GGCTTCGTCA ACAACCTGAC CGACAAGAAG TACCGGCTCT ACAATCTCGA CCTGTCGGGC
CCGTTCGGCT TCACCCAGCA GGCCTATGCC CGGCCGCGCT GGTTCGGCGC GAGCGTCACC
CGCAGCCTGT AA
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| Protein sequence | MMQSQLRSLS QASGKALAAA LMLTGVHGAA LAQDGGATAE AEAPAYGDIV VTAQKREQNI
QKVGVAISAL GKQGLADLGR QDISALATKL PSVQVLAYSP TLTVFNIRGV SQNDFADSQE
APIAFYNDEV YVSALGAISG QMFDLERVEM LRGPQGTLFG RNATGGLIQV VSAKPTRDLT
GFGTVTVGSY GQVATEGAIS GPLSDTLRAR LSFSTNHHGG YIDNSIGKDL GNSKFYGGRF
QLAGDVGEGG EFTLKLQGLR NDKERTGGLY SHRTAIANAD GLGEYVGRND NPFGTCAGCD
MFGYVQAGND PFKVAFNGPN NFSRSYWSAS LRYVQDLGGV TLTSISDYQY LRKRYGEDAD
MSPASTFAYS TSQNLDQYSQ ELRLSNSSDR ATWVVGGYAI KIVSKNGYNT DLTGSLGLSE
IYGGTLKTTS FAGFGQLEYN LTDQVALIGG LRYSADRKTI DFTHAENGVT DFTFDRASVG
KLARQKFNDW SGKAGINFKP NEDTLIYASV NRGIKGGGFG TPAFNPGDLT TIPFKEEVLT
DYEGGVKLTL FDRTTHLNLS AFYYDYKDYQ AFELVDLALA VRNKDATIKG VEAEFNTRPV
DGLYLQTFAT YLDSKVKGVI LPGGRVANTR MPQAPKWSIG WLVRYELDAG PGRLALQTDW
KYDSAQYLST FNAPVDRQPG RVVGNARVTY GFGDGKWEVA GFVNNLTDKK YRLYNLDLSG
PFGFTQQAYA RPRWFGASVT RSL
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