| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4332 |
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| Symbol | |
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| ID | 5197798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4777159 |
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| End bp | 4779498 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640583886 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001264810 |
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| Protein GI | 148557228 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGT TCAGCATCAT CGCGCGGGCC CTGGCGGTCG CCGCGCTCGC ATCATCGAGC
GCCGTCGCCC TGGCACAGGC GGCCGGGCCG CAGGCCGCCG ACGATAGCGG CGACATCATC
GTCACGGCGC AGAAACGCGC CGAGCGGCTC CGCGACGTGC CGATGTCGAT CAACGCGGCG
ACCGGCGATC ACCTCAAGGC GCTCGGCGTC ACCAGCAGCG AGCAGCTCGA AAAGCTGGTG
CCGGGCTTCA CCTTCCAGCG CACCGTCTAC GGCCTGCCGG TCTTCTTCCT GCGCGGCATC
GGCTTCAACG ACACGACGCT GGGCGTCAGT CCGGGCGTCT CGGTCTATGT CGACCAGCAG
CCGCTGCCTT TCTCGGCGAT GACGCGCGGC GCGATGCTCG ATCTCGAACG GGTCGAGGTG
CTGAAGGGAC CGCAGGGCAC GTTGTTCGGG CAGAACTCGA CCGGCGGCGC GATCAACTAT
ATCGCCGCCA AGCCGACCGA CAGCTTCAAG GCCGGAATCG AGGCGTCCTA TGGCCGCTTC
AACGAGGTCA CCGGCGAAGC CTTCGTCAGC GGCCCGCTGA CCGACAGCCT GTCCGCCCGC
GTCGCTGTGC GCGGCGAGCG CCAGGACGAC TGGCAGCGCG GCTATACCAA TGGCGACGAG
ATCGGGCGGC GGCGCTTCGT CAACGGTCGC GCGATCGTCG ACTGGCATCC GGACTCGGCG
GTCCGCGCCC AACTGATGGC GACGGCCTGG CACGACGGCT CCGATACGCA GCAGCCGCAG
ACGGTCGCCT ATACGCCGCT GGTGACGGGG CCGATGGCGC GGCCCATTCC CTTTCCGCTG
GCAAGCTTCC CGGTGTCGCC GCGCTCGCCG CGCGCCGCCG CCTGGGACCC CGGCGTCGAT
TTCGCGCGCG ACGATCGTCT CTATCACGTC GCCGGCCGGG TCGAGGTCGA TCTGGGCGGA
GACATGACGC TGACCTCGCT GACCTCCTAT GCCGATTATC GGCAGAGCAT ACCGCTCGAT
CTCGACGGGA CCACCTTCGC TTCCGGCCGG TCCGACGACA CCGGCCGGAT CAAGACCTTC
GCGCAGGAGA TCCGCCTGAC CGGCGACAGG CCGTCGGGCC TCAAATGGAT GGTCGGCGGC
AATTACCAGC ACGACAAGGT GTTCGAGCGG CTGGTGTTCG ATCCGCTGAT CACCTCGGGC
ACGGCGGTCG GCCCGGTGCC GTTCAACGCC TTCTTCGTCG ACAACGACCA GCGGATCGCC
TCGAAGGCGG TCTTCGCCAG CGTCGACCTG CCGCTCGCCG ATCGCCTCGT CCTGCAGGGA
TCGGTCCGCT ACACCGACCA GGATCGCGAC TTCGCCGGCT GCGTGCGCGA CACCGGCAAT
GGCGAGATCG CGGCCGCGCT GGGCCTGCTC GGCACCATCA TCACCGGCGC GCCGCAGTCG
ATCCCGCCGG GCGGCTGCGG AACGCTCGGC GCCAATGGTG CGCCCGTGCC GATCGTCACC
GGCAAGCTCG ACCAGGACAA TCTGTCCTGG CGGGCCAGCC TGAACTGGAC GCTGGGCGGG
CAGGGGTTGC TCTACGCCAA TATCACCAAG GGTTATAAGT CGGGCAGCTT CCCGACGCTG
CCGGCCTCGT CCGCCGTCCA GCTTCGGCCG GTGCCGCAGG AATCGGTCCT CGCCTTCGAA
GCCGGCGCCA AGCTGGGCTT CGGCCGAAGC CTCCAGATCG AGGCGGCCGC CTTCTATTAT
CGCTATCGCG ACAAGCAACT CGTCGGCTTC CTCGTCGATC CGGTGTTCGG TCCGCTGCCG
AGCCTCGTCT CGATCCCGAA GAACCATGTC CAGGGCGGCG AGATCACCGC CACCCTGCGG
CCCACCGCCG GCCTGGTGGT GACGGCGAGC GGCACCTATG TCGACACCCG GATCGACCGC
AATCCGATCA ACCCGACCGG GCCCTATGGC ACGCCCTCCG ACTTCGTCGG CCAGCGCTTC
CCCTATACGC CGCGCTGGCA GGGGAGCCTC GACGCGCAAT ATCGCTTCCC GGTCTTCGCC
GGTCTCGACG CCTTCCTCGG CGGAACGGTC AGCGCGCGGA GCGGCACGAC CGGCGCGCTG
CTGAGCGGCG ATCCGGCGGT CGCGGCGCTC GAGGACGGGC TGCGGATCGA CGGCTATGCG
CTGATCGACC TGCGCGCCGG GATCGAGGCG GCCGACGAGC GCTGGCGGCT CGAACTGTGG
GGCCGCAACG TCACCAACAG ATTCTACGTG AACGGCGTCA CCCGCAATTC CGACTTCACG
ACCCGCTTCG CCGGCATGCC CGCCACCTAC GGCCTGACCG TCCGCTACCG GTTCGACTGA
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| Protein sequence | MKQFSIIARA LAVAALASSS AVALAQAAGP QAADDSGDII VTAQKRAERL RDVPMSINAA
TGDHLKALGV TSSEQLEKLV PGFTFQRTVY GLPVFFLRGI GFNDTTLGVS PGVSVYVDQQ
PLPFSAMTRG AMLDLERVEV LKGPQGTLFG QNSTGGAINY IAAKPTDSFK AGIEASYGRF
NEVTGEAFVS GPLTDSLSAR VAVRGERQDD WQRGYTNGDE IGRRRFVNGR AIVDWHPDSA
VRAQLMATAW HDGSDTQQPQ TVAYTPLVTG PMARPIPFPL ASFPVSPRSP RAAAWDPGVD
FARDDRLYHV AGRVEVDLGG DMTLTSLTSY ADYRQSIPLD LDGTTFASGR SDDTGRIKTF
AQEIRLTGDR PSGLKWMVGG NYQHDKVFER LVFDPLITSG TAVGPVPFNA FFVDNDQRIA
SKAVFASVDL PLADRLVLQG SVRYTDQDRD FAGCVRDTGN GEIAAALGLL GTIITGAPQS
IPPGGCGTLG ANGAPVPIVT GKLDQDNLSW RASLNWTLGG QGLLYANITK GYKSGSFPTL
PASSAVQLRP VPQESVLAFE AGAKLGFGRS LQIEAAAFYY RYRDKQLVGF LVDPVFGPLP
SLVSIPKNHV QGGEITATLR PTAGLVVTAS GTYVDTRIDR NPINPTGPYG TPSDFVGQRF
PYTPRWQGSL DAQYRFPVFA GLDAFLGGTV SARSGTTGAL LSGDPAVAAL EDGLRIDGYA
LIDLRAGIEA ADERWRLELW GRNVTNRFYV NGVTRNSDFT TRFAGMPATY GLTVRYRFD
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