Gene Swit_4322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4322 
Symbol 
ID5199413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4766167 
End bp4766925 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content68% 
IMG OID640583876 
ProductGntR family transcriptional regulator 
Protein accessionYP_001264800 
Protein GI148557218 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAC CCGACACGGG CACCAGAGGA GAAGCCGTCG CGGCCTGGAT TCGCGAGCGG 
ATCGTCAATG GCGAGCTGAC CCCGGGAACG CATCTCCAGG AACAGGCGAT CGGCAACCTC
ACCGGCACCT CGCGGACGCC GGTGCGCGAG GCGCTGAAGC TGCTCCAGCG CGAGCAGCTC
GTCCTCTATT CGCCCAATCG CGGCTATGTC GTCCGCCGCT TCAGCCTCAA GGACATATTG
GACGCCTTCG ACGTCCGCGC CACGCTGGAG GGCATGGTCT GCCGGCTGGT CGCCACCAAG
GGGCTGAGCG CCGAGGCCGA CGCCCGGCTG TCCGAGGTCG ACGAGGAGAT GCGGCAGGTG
GCGTTCGGGA CGACCTGGGG CGAGCGCGCG AGCTTCCGCT GGTTCGATCT CAACGGCTAT
TTCCACAAGC TGCTGATCGA GGAAGCCGAC AATCCGATGC TCGCCAGCGT CATCATCCAG
ACGCAGCGCC TGCCGCTGAT CTTCGATTCG AACCAGCGCC TGCGAAGCGC GGTGCAGGTC
AGCCGGATGT TCGGCGAGGA GGACACCCAG CGCTCCTACC GCGACCACAA GGCGATCGTC
TCGGCGATCC GGGCGCGCGA TGCGGGCGAG GCCGAGCGGC TGATGCGCGG CCATATCCTC
GAGAGCCGCG AGACGATGCG GCGGAATTTC GGCCGGGCCT ATCCGGACCC GGCCGTGGCA
GCCGACGGCG ACGCTGTGGC GGAGCCGCCG GCCGCCTGA
 
Protein sequence
MIEPDTGTRG EAVAAWIRER IVNGELTPGT HLQEQAIGNL TGTSRTPVRE ALKLLQREQL 
VLYSPNRGYV VRRFSLKDIL DAFDVRATLE GMVCRLVATK GLSAEADARL SEVDEEMRQV
AFGTTWGERA SFRWFDLNGY FHKLLIEEAD NPMLASVIIQ TQRLPLIFDS NQRLRSAVQV
SRMFGEEDTQ RSYRDHKAIV SAIRARDAGE AERLMRGHIL ESRETMRRNF GRAYPDPAVA
ADGDAVAEPP AA