Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4322 |
Symbol | |
ID | 5199413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4766167 |
End bp | 4766925 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640583876 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001264800 |
Protein GI | 148557218 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAC CCGACACGGG CACCAGAGGA GAAGCCGTCG CGGCCTGGAT TCGCGAGCGG ATCGTCAATG GCGAGCTGAC CCCGGGAACG CATCTCCAGG AACAGGCGAT CGGCAACCTC ACCGGCACCT CGCGGACGCC GGTGCGCGAG GCGCTGAAGC TGCTCCAGCG CGAGCAGCTC GTCCTCTATT CGCCCAATCG CGGCTATGTC GTCCGCCGCT TCAGCCTCAA GGACATATTG GACGCCTTCG ACGTCCGCGC CACGCTGGAG GGCATGGTCT GCCGGCTGGT CGCCACCAAG GGGCTGAGCG CCGAGGCCGA CGCCCGGCTG TCCGAGGTCG ACGAGGAGAT GCGGCAGGTG GCGTTCGGGA CGACCTGGGG CGAGCGCGCG AGCTTCCGCT GGTTCGATCT CAACGGCTAT TTCCACAAGC TGCTGATCGA GGAAGCCGAC AATCCGATGC TCGCCAGCGT CATCATCCAG ACGCAGCGCC TGCCGCTGAT CTTCGATTCG AACCAGCGCC TGCGAAGCGC GGTGCAGGTC AGCCGGATGT TCGGCGAGGA GGACACCCAG CGCTCCTACC GCGACCACAA GGCGATCGTC TCGGCGATCC GGGCGCGCGA TGCGGGCGAG GCCGAGCGGC TGATGCGCGG CCATATCCTC GAGAGCCGCG AGACGATGCG GCGGAATTTC GGCCGGGCCT ATCCGGACCC GGCCGTGGCA GCCGACGGCG ACGCTGTGGC GGAGCCGCCG GCCGCCTGA
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Protein sequence | MIEPDTGTRG EAVAAWIRER IVNGELTPGT HLQEQAIGNL TGTSRTPVRE ALKLLQREQL VLYSPNRGYV VRRFSLKDIL DAFDVRATLE GMVCRLVATK GLSAEADARL SEVDEEMRQV AFGTTWGERA SFRWFDLNGY FHKLLIEEAD NPMLASVIIQ TQRLPLIFDS NQRLRSAVQV SRMFGEEDTQ RSYRDHKAIV SAIRARDAGE AERLMRGHIL ESRETMRRNF GRAYPDPAVA ADGDAVAEPP AA
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