Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4321 |
Symbol | |
ID | 5199389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4765246 |
End bp | 4766157 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640583875 |
Product | pirin domain-containing protein |
Protein accession | YP_001264799 |
Protein GI | 148557217 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTCAA CAAGCGGCCT TCCCGGAAGG CACAGGAGAT ATGCGATGAA GACCATATTC GGCATCCACG GCAATTCCGC CCGGCATTGG GTCGGCGACG GTTTCCCGGT TCGCTCGCTC TTTTCCTACA ACAGCCTCGG CGGGCAGGTG AGCCCGTTCC TGCTGCTCGA CTATGCCGGC CCCCATGTCT TCGGGCCGAC GACCGGCCGG CGCGGCGTGG GGCAGCATCC CCATCGCGGG TTCGAGACGG TCACGATCGT CTATGACGGC GAGGTCGAGC ACAAGGATTC GGCCGGCAAT GGCGGCATCA TCGGCCCCGG TGACGTCCAG TGGATGACCG CGGCCGGCGG CATCCTGCAC GAGGAATATC ATTCCGAGGC GTTCGCCAGG ACCGGCGGGC CGTTCCGCAT GGTCCAGCTC TGGGTCAACC TGCCCGCGAA GGACAAGATG GCGCCCGGCG GCTATCAGGG CATCGTCGCG GCCGACATCC CGACCGTCGA CCTGCCCGGC GGCGCCGGCA CCGGCCGGGT GATCGCGGGC GAGCTACTCG GCGCGAAGGG GCCGGCGCGG ACCTTCACCC CGATCAACGT CTGGGACGTG CGGCTGAACC GCGACGCCGA CCTGACCCTC GACCTGCCCG AAGGCCATGT CGCGCTGCTC GTCGTGCTCG GTGGCCATGT CACGGTGAAC GGCGGGGCGG GCGCGGGCGA GGCGGAGGTG GTGCAGCTCA GCCGCGAGGG CGGCGCGGTG CGCATCCAGG CCGATGGCGA CGCGGTGCTG CTGGTCCTGA CCGGCGAGCC GATCGACGAG CCGATCGTCG GCTACGGCCC GTTCGTGATG AACAGCGAGA CGGAGATCCG CCAGGCGATC GACGACTTCA ACAAGGGCAG GTTCGCGCAA GCCGCGGCCT GA
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Protein sequence | MVSTSGLPGR HRRYAMKTIF GIHGNSARHW VGDGFPVRSL FSYNSLGGQV SPFLLLDYAG PHVFGPTTGR RGVGQHPHRG FETVTIVYDG EVEHKDSAGN GGIIGPGDVQ WMTAAGGILH EEYHSEAFAR TGGPFRMVQL WVNLPAKDKM APGGYQGIVA ADIPTVDLPG GAGTGRVIAG ELLGAKGPAR TFTPINVWDV RLNRDADLTL DLPEGHVALL VVLGGHVTVN GGAGAGEAEV VQLSREGGAV RIQADGDAVL LVLTGEPIDE PIVGYGPFVM NSETEIRQAI DDFNKGRFAQ AAA
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