Gene Swit_4290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4290 
Symbol 
ID5196611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4730951 
End bp4731580 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content75% 
IMG OID640583844 
Producthypothetical protein 
Protein accessionYP_001264768 
Protein GI148557186 
COG category 
COG ID 
TIGRFAM ID[TIGR03135] holo-ACP synthase, malonate decarboxylase-specific 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGA TGCCCGTCCT GCGCCGCCAC GACCTCGTCC ATCTCCGGTC GGGTGCGCGG 
ATCGAGGGTG TCGCCGCCGC TCCCGAAGTG TTGCTGGCGG ATTGGGTGGC GCAGGGGCGG
CCCTTCATCG CGCGGCGGCC GGCCTGCGCG GACCGGGGCG ATCGGGTCCC GATCGGCCTG
CCGCTTCCTC TCGCCTTGGG CAAGGCGCGG CTGGCGCTGG CCGTGGCCCC CGAGGCGATG
GCCGCGATCG TGCCGCCGCC CTTGCTGGCC GATGCCGCCG CCGTCGCGCC ACCGGGCTGG
GCGCAGCGGA TCGGCGCGCT GCTCGCGGCT TTTCCGGAGG CGCGCTGCTT CGGCAGCCTC
GCCTGGCAGC ATCTGACCGG GCTCGCCTAT CTCTCCGCCG GCTCCGACCT CGACCTGCTG
CTGCCCTGCG CGTCGGTCCG CGAGGCCGCT GCCGCTGCCG CGCGCCTTGC CGCGATCGGC
GCGGAGGAGG GCCCGGCGAT CGACGGCGAG CTGGTCGCGC CGTCGGGCGA GGCGGTCCAG
TGGCGCGAAT GGGCCTCCGC CGCCGCGCAG GTCGCGGTGA AGGCGATCGA CGGCGTTCGT
CTCGCACGGC GGGAAGAGGT CTTTCCATGA
 
Protein sequence
MAEMPVLRRH DLVHLRSGAR IEGVAAAPEV LLADWVAQGR PFIARRPACA DRGDRVPIGL 
PLPLALGKAR LALAVAPEAM AAIVPPPLLA DAAAVAPPGW AQRIGALLAA FPEARCFGSL
AWQHLTGLAY LSAGSDLDLL LPCASVREAA AAAARLAAIG AEEGPAIDGE LVAPSGEAVQ
WREWASAAAQ VAVKAIDGVR LARREEVFP