Gene Swit_4284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4284 
Symbol 
ID5199264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4726026 
End bp4726790 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content70% 
IMG OID640583838 
Productmalonate/sodium symporter MadM subunit 
Protein accessionYP_001264762 
Protein GI148557180 
COG category 
COG ID 
TIGRFAM ID[TIGR00808] malonate transporter, MadM subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0339134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.953551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGC TCTCCCACGC CCTGATCGAC AACGGGCTGC TGACTGCCTT CGCGGTGGTC 
GGCATCGTCA TGTGGCTGTC CAACAGCCTG TCGAAGCGCC TCACCTTCGG CCGCATCCAC
GGATCGGCGA TCGCGATCAT CCTCGGCCTC GCCGCCGCCT TCGTGGCCGG TCTCTGGACC
CATGGCCAGA AGGGCGTCGC CGACCTGCCG GTGCTGGCCG GCATCGGCCT GATGGGCGGG
GCGATGCTCC GCGACTTCGC GATCACCGCC ACTGCCTTCG AGGTCGATGT CGCCCATGCG
AAGAAGGCCG GGCTGGTCGG CGCCGCCGCG CTCGGCCTCG GCACCATCTT GCCGTTCATC
GTCGGCGTGC TGGTCGCCGC GGCCTTCGGT TATCGGGACG CGGTGTCGCT GACGACGATC
GGCGCCGGCG CGGTCACCTA TATCGTCGGC CCGGTCACCG GCGCGGCGCT CGGCGCCAGT
TCGCCGGTCA TCGCCCTGTC GATTGCGACC GGCGTGTTCA AGGCGGTGCT GGTGATGATC
GGCACGCCGA TGGTCGCGCA CATGATCGGG CTCGACAATC CGCGCTCGGC GATGGTGTTC
GGCGGGCTGA TGGGAACGGT CAGCGGCGTT TCGGGCGGCC TCGCCGCGAC CGACCGCCGC
CTCGTCCCCT ATGGCGCGCT GACCGCGACC TTCCACACCG GGCTCGGCTG CCTGGTGGCG
CCGTCGCTGC TGTACCTCGC GGTGCGGGCG ATCGTGGGAG GCTGA
 
Protein sequence
MNALSHALID NGLLTAFAVV GIVMWLSNSL SKRLTFGRIH GSAIAIILGL AAAFVAGLWT 
HGQKGVADLP VLAGIGLMGG AMLRDFAITA TAFEVDVAHA KKAGLVGAAA LGLGTILPFI
VGVLVAAAFG YRDAVSLTTI GAGAVTYIVG PVTGAALGAS SPVIALSIAT GVFKAVLVMI
GTPMVAHMIG LDNPRSAMVF GGLMGTVSGV SGGLAATDRR LVPYGALTAT FHTGLGCLVA
PSLLYLAVRA IVGG