Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4284 |
Symbol | |
ID | 5199264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4726026 |
End bp | 4726790 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640583838 |
Product | malonate/sodium symporter MadM subunit |
Protein accession | YP_001264762 |
Protein GI | 148557180 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00808] malonate transporter, MadM subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0339134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.953551 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCGC TCTCCCACGC CCTGATCGAC AACGGGCTGC TGACTGCCTT CGCGGTGGTC GGCATCGTCA TGTGGCTGTC CAACAGCCTG TCGAAGCGCC TCACCTTCGG CCGCATCCAC GGATCGGCGA TCGCGATCAT CCTCGGCCTC GCCGCCGCCT TCGTGGCCGG TCTCTGGACC CATGGCCAGA AGGGCGTCGC CGACCTGCCG GTGCTGGCCG GCATCGGCCT GATGGGCGGG GCGATGCTCC GCGACTTCGC GATCACCGCC ACTGCCTTCG AGGTCGATGT CGCCCATGCG AAGAAGGCCG GGCTGGTCGG CGCCGCCGCG CTCGGCCTCG GCACCATCTT GCCGTTCATC GTCGGCGTGC TGGTCGCCGC GGCCTTCGGT TATCGGGACG CGGTGTCGCT GACGACGATC GGCGCCGGCG CGGTCACCTA TATCGTCGGC CCGGTCACCG GCGCGGCGCT CGGCGCCAGT TCGCCGGTCA TCGCCCTGTC GATTGCGACC GGCGTGTTCA AGGCGGTGCT GGTGATGATC GGCACGCCGA TGGTCGCGCA CATGATCGGG CTCGACAATC CGCGCTCGGC GATGGTGTTC GGCGGGCTGA TGGGAACGGT CAGCGGCGTT TCGGGCGGCC TCGCCGCGAC CGACCGCCGC CTCGTCCCCT ATGGCGCGCT GACCGCGACC TTCCACACCG GGCTCGGCTG CCTGGTGGCG CCGTCGCTGC TGTACCTCGC GGTGCGGGCG ATCGTGGGAG GCTGA
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Protein sequence | MNALSHALID NGLLTAFAVV GIVMWLSNSL SKRLTFGRIH GSAIAIILGL AAAFVAGLWT HGQKGVADLP VLAGIGLMGG AMLRDFAITA TAFEVDVAHA KKAGLVGAAA LGLGTILPFI VGVLVAAAFG YRDAVSLTTI GAGAVTYIVG PVTGAALGAS SPVIALSIAT GVFKAVLVMI GTPMVAHMIG LDNPRSAMVF GGLMGTVSGV SGGLAATDRR LVPYGALTAT FHTGLGCLVA PSLLYLAVRA IVGG
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