Gene Swit_4267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4267 
Symbol 
ID5200894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4705475 
End bp4706140 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content69% 
IMG OID640583821 
Producthypothetical protein 
Protein accessionYP_001264745 
Protein GI148557163 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.308533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCTG CGGACGGGGC CGCATCGGTC GCGCGTCCGG CCGGGAAAGG GCATGATTTC 
CATTGCTACG ATCCCGCCGT CGGTCATGGC CTGCGGCACA ATCCGATGCA GGCGATCATC
GCGCCGCGAC CGATCGGCTG GATATCGTCG GCCAGCGCGG CGGGCGTCAA CAACCTCGCG
CCCTACAGCT TCTTCAACAT GTTCCGCGCG ACGCCGCCGC TGATCGGCTT CTCCAGCGGC
GGGCGGAAGG ACAGCCTGCG CAATGCCGAG GAGACCGGGC GCTTCGTCTG GAACCTGGCG
ACCCGCTCGC TCGCCACGGC GATGAACCTC TCCTCCGCCG TCGTCCCGCA CGAGGTGGAC
GAGTTCGCGC TCGCCGGGCT GACGCCGATG CCGTCGAGCT TCGGCAGCCC GCCCTGCGTC
GCCGAAGCCC CCGTCTCGTT CGATTGCGTG CTGACCCAGA TCGTCGACCT GCGGGATCGC
CACGGCCAGC CCTCGGGATC GCACCTCGTC ATCGGCGAGG CGGTCCATGT CCGCATCGCC
CGCACCCTGA TCGCCGACGG GGTCTACGAC ACGCTGGCGA GCGATCCCAT CCTTCGCGGC
GGCGGCACCG CGGACTATTT CCATCTGACG CCGGACGGCC ATTTCCGGAT GGAACGACCG
GACTGA
 
Protein sequence
MPPADGAASV ARPAGKGHDF HCYDPAVGHG LRHNPMQAII APRPIGWISS ASAAGVNNLA 
PYSFFNMFRA TPPLIGFSSG GRKDSLRNAE ETGRFVWNLA TRSLATAMNL SSAVVPHEVD
EFALAGLTPM PSSFGSPPCV AEAPVSFDCV LTQIVDLRDR HGQPSGSHLV IGEAVHVRIA
RTLIADGVYD TLASDPILRG GGTADYFHLT PDGHFRMERP D