| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4252 |
|---|
| Symbol | |
|---|
| ID | 5199297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 4684536 |
|---|
| End bp | 4685570 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640583806 |
|---|
| Product | 2OG-Fe(II) oxygenase |
|---|
| Protein accession | YP_001264730 |
|---|
| Protein GI | 148557148 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3491] Isopenicillin N synthase and related dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACC AGGCGACGCC GGTATCCCCG TCGAGGCCCC GGCGCTGGGA GCGCTCGGCG
GTCGAGGAGA TACCGGTGCT CGACCTGGGC CGCTACATGG CGGGCGACGA CGGCGAGATC
GAACGGCTCG CCGCCGAGCT CGGCCATGCC CAGCAGCATA TCGGCTTCTT CTACATCACC
AACCACGGCA TCGCGCAGGA GTTGGTCGAC CGGGTCTTCG CCGAGACCGC GCGCTTCCAC
GCCCTGCCGA CCGAGGAGCG GCTGAAGCTG CTGATCGACG ACCAGCAGAC CGGCTACGCC
CCGATGAAAT CGAGCCAGAT CGAGGACGGC GACGTCGCGG TCGAGAAATC GCCGCACAAG
CCCGACCTCA GCGAGGCGAT CTGGATCCGG CGCGATCGTC CCGACGACGA TCCCGAGCTG
GTGGCGGGGC GCCCGTTCCG GCGCAACAAA TGGCCTCAGG GACTACCCGG CTTCCGCGAG
ACGATCCGCG CCTATCAGCA GGCGATGGAG GCGCTGGGCC GGCGGATGCT GCCGCTCTAC
GCGCGGGCGC TCGACCTCCC CGACGTCTAT TTCGACCCGC TGTTCGACCG GGCCGACATC
CCGGTGCGGC TGGGCCATTA TCCGGCCGAC CTGGTCGGCG ACGCAAACCA GTTCGGCGCC
GCGCCGCATA ACGACGCGGG TTTCCTGACC CTGCTGCCGC AGCCCGAGGA AGACGGCCTC
GAAGTGCTGA CCCAGTCGAA GAAGTGGATT CCGGCGCCGG TGCGGCGCGG CGATATCCTC
GTCAACGGCG GCAACTGCCT GGTCCGCTTC AGCAACGGGC GCTTCCTGTC GACGCCCCAC
CGGGTCCTCG CCGGCCGGCC GCGCCCCCGC TATTCGATCC CGCTCTTCTA CAATCCCAAT
TTCGACGCGG TGGTGCAGCC GGTGCCGAGC TGCGTCTCGG CCGATCGCCC GGCGATGTAC
GAGCCGACGA CCTACGAGCA ATATATCATC GACTATCTGG CGCGGGTGTA CGCCCACCGG
CGCAAGCCGG GCTGA
|
|---|
| Protein sequence | MNDQATPVSP SRPRRWERSA VEEIPVLDLG RYMAGDDGEI ERLAAELGHA QQHIGFFYIT
NHGIAQELVD RVFAETARFH ALPTEERLKL LIDDQQTGYA PMKSSQIEDG DVAVEKSPHK
PDLSEAIWIR RDRPDDDPEL VAGRPFRRNK WPQGLPGFRE TIRAYQQAME ALGRRMLPLY
ARALDLPDVY FDPLFDRADI PVRLGHYPAD LVGDANQFGA APHNDAGFLT LLPQPEEDGL
EVLTQSKKWI PAPVRRGDIL VNGGNCLVRF SNGRFLSTPH RVLAGRPRPR YSIPLFYNPN
FDAVVQPVPS CVSADRPAMY EPTTYEQYII DYLARVYAHR RKPG
|
|---|
| |