Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4217 |
Symbol | |
ID | 5196255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4646860 |
End bp | 4647429 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640583771 |
Product | hypothetical protein |
Protein accession | YP_001264695 |
Protein GI | 148557113 |
COG category | [S] Function unknown |
COG ID | [COG3812] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.221932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTGA CGGATATGCT CGTTCCGACC TATGTGCAGA TGCTCGGGGC GCTGTCGGCG TGGCTCGGCA AGGCCGGGGA GCAGAAGCCG TCCGGCGAGG CCGAAGCGCT CCTGCTCGCG CGCCTCGCTC CGGACATGTT CCCGCTATCG ACCCAGATCC GGTTCGCCTG CGTCCAGGCG CAGGAGGGCA TGGCGCGGCT GCGCGGCGAA GCGCTCCCGC CGTCGATAAC GGTGCTGCTG GAGGAAGGGC GCAACGCCGC CGAGCGCCCC GGCTCGCTCG CCGACGCACG CGCGCGGATC GCCGAGACGC TGGCGATCGT CGAAGCGGCG GCGGCCGACA TGCCGGACGT CGACCCGGAA ATGCCGATCG CGCACGCCCT GCCGCAGGGC ATGATCTTCG ACCTGACGGC CGAGCAATAT GTGCGCGACT GGACGCTGCC GCAATTCTAC TTCCACGTCA TGGCCGCCTA CGCGATCCTG CGCGCGCAGG GCGTCGCGCT GGGCAAGGCC GACTATGTCG CGCACATGTT CGCCTATCTG CGACCGGGCA CGCTGCCTGC CCAGCCGTGA
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Protein sequence | MTLTDMLVPT YVQMLGALSA WLGKAGEQKP SGEAEALLLA RLAPDMFPLS TQIRFACVQA QEGMARLRGE ALPPSITVLL EEGRNAAERP GSLADARARI AETLAIVEAA AADMPDVDPE MPIAHALPQG MIFDLTAEQY VRDWTLPQFY FHVMAAYAIL RAQGVALGKA DYVAHMFAYL RPGTLPAQP
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