Gene Swit_4217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4217 
Symbol 
ID5196255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4646860 
End bp4647429 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content70% 
IMG OID640583771 
Producthypothetical protein 
Protein accessionYP_001264695 
Protein GI148557113 
COG category[S] Function unknown 
COG ID[COG3812] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.221932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGA CGGATATGCT CGTTCCGACC TATGTGCAGA TGCTCGGGGC GCTGTCGGCG 
TGGCTCGGCA AGGCCGGGGA GCAGAAGCCG TCCGGCGAGG CCGAAGCGCT CCTGCTCGCG
CGCCTCGCTC CGGACATGTT CCCGCTATCG ACCCAGATCC GGTTCGCCTG CGTCCAGGCG
CAGGAGGGCA TGGCGCGGCT GCGCGGCGAA GCGCTCCCGC CGTCGATAAC GGTGCTGCTG
GAGGAAGGGC GCAACGCCGC CGAGCGCCCC GGCTCGCTCG CCGACGCACG CGCGCGGATC
GCCGAGACGC TGGCGATCGT CGAAGCGGCG GCGGCCGACA TGCCGGACGT CGACCCGGAA
ATGCCGATCG CGCACGCCCT GCCGCAGGGC ATGATCTTCG ACCTGACGGC CGAGCAATAT
GTGCGCGACT GGACGCTGCC GCAATTCTAC TTCCACGTCA TGGCCGCCTA CGCGATCCTG
CGCGCGCAGG GCGTCGCGCT GGGCAAGGCC GACTATGTCG CGCACATGTT CGCCTATCTG
CGACCGGGCA CGCTGCCTGC CCAGCCGTGA
 
Protein sequence
MTLTDMLVPT YVQMLGALSA WLGKAGEQKP SGEAEALLLA RLAPDMFPLS TQIRFACVQA 
QEGMARLRGE ALPPSITVLL EEGRNAAERP GSLADARARI AETLAIVEAA AADMPDVDPE
MPIAHALPQG MIFDLTAEQY VRDWTLPQFY FHVMAAYAIL RAQGVALGKA DYVAHMFAYL
RPGTLPAQP