| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4188 |
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| Symbol | |
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| ID | 5196660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4608880 |
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| End bp | 4610169 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640583742 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001264666 |
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| Protein GI | 148557084 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0795618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGAGA CATACGACGG AAAAAATGCA CCCGATGCGG TTCCTCTCGA GGAGCGGGTG
CGCGAGGATC GCCTTCACGC GTCGCTCTAC ACCGATCCCG ACATCTTCCA CCGGGAGATC
GAGCGGATTT TCCATGGCGG CTGGGTGTGG GTCGCCCATG AAAGCGAGAT CCCCGAGCCC
GGTGATTTCA AGACGACCGA AATCGGCCTG TCGCCGATCA TCGTCACACG GGCGAAAAGC
GGCCGCGTGC ATGTCCTTTT GAACCGATGC CGGCACAAGG CGGCGACGGT CTGCGAAAGC
CAGCGGGGCA ACACGTCGAG CTTCACCTGT CCCTATCACG CCTGGAGCTA TGGGCTGGAC
GGACGCCTGC TCGGAATACC CTATGAGGAC GGATATGACG GCCTCGTCGA CAAGAAGCAG
CTACCGCTCC ACGCGCTCGA GGTCGGCATC TATGCGGGTC TGATCTTCGC CTCGATGAAT
CCCGAGGTGG AGCCGCTGGA CAGCTTCCTG GGCCCGGCCC GGCCATGGAT CGACCTGTTC
ATGCACCAGG GGGGCGGCTT TCCCGTCAAG GCGTCCGGAG CGCATGCCTT CCGCTTCAAC
GGCAATTGGA AGATCCAGCT CGAAAATACG ACCGATGCCT ACCACTTTCC CTTCGTCCAT
CGTTCCTTCA TCCATTCGGT GAGCGCGGAG ATGGCGAAGA CGTTCACCAC CTTCGTGCGG
CAGGAGGGGC CGCATGTGCG CGCGCTCGGC AATGGGCATA GCGTCGCGGT CTTCTTCCCC
GAAAATGTCG ATATCAGGTC GGACGACGGC CGCCCGATCC CGGCGCATTT CGAGCCGCTG
GCCGCGGAAC TGGCCAGGCA ATTCCCGATG GACCGGGTGC GCTGGATCAT CCGGGCGATC
GGCGGCGTGG GTTTCAACCT CAACCTGTTC CCCAATATCG GCCTTTCGGC GGCCTTCCTG
CGCGAGCTGC GGCCGCTTGC GGTCGATCGC ACCGAAATCC GGCACATCGC GCTGACGATG
GACGGGGCGC CGGCCGAAGT GAACCGCCTG CGCTTGCGCC TTCACGAGAA ATTCCAGGGC
TCGGGAGGCT TCGGCAGTCC GGACGACATG GAGGCATGGG AACGGGTCCA GCGCGGCGCG
GGGGCCGACA GGGACGACAT GTGGATCCTG CTCAACCGCG GCCTGGGCCG TGAAAAGGCC
GATGCGGACG GGCAGCGCCA TTCGCACGTC ACCGACGAGA CCGGCATGCG CGAAGCCTAT
GCGATGTGGA GAAAGGCGAT GATCGGATGA
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| Protein sequence | MLETYDGKNA PDAVPLEERV REDRLHASLY TDPDIFHREI ERIFHGGWVW VAHESEIPEP
GDFKTTEIGL SPIIVTRAKS GRVHVLLNRC RHKAATVCES QRGNTSSFTC PYHAWSYGLD
GRLLGIPYED GYDGLVDKKQ LPLHALEVGI YAGLIFASMN PEVEPLDSFL GPARPWIDLF
MHQGGGFPVK ASGAHAFRFN GNWKIQLENT TDAYHFPFVH RSFIHSVSAE MAKTFTTFVR
QEGPHVRALG NGHSVAVFFP ENVDIRSDDG RPIPAHFEPL AAELARQFPM DRVRWIIRAI
GGVGFNLNLF PNIGLSAAFL RELRPLAVDR TEIRHIALTM DGAPAEVNRL RLRLHEKFQG
SGGFGSPDDM EAWERVQRGA GADRDDMWIL LNRGLGREKA DADGQRHSHV TDETGMREAY
AMWRKAMIG
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