Gene Swit_4157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4157 
Symbol 
ID5198117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4572371 
End bp4573084 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content69% 
IMG OID640583711 
Productdienelactone hydrolase 
Protein accessionYP_001264635 
Protein GI148557053 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.138582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0101627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGCC AGGATCTTAC CGTCGTCCAT AATGGAACCG CCCTGACCGG ACGGCTCATC 
TGGGACGAGA CGCGGACGGG CGAGCGGCCC GGCGTCCTCG TCATCCACGA GGCCACCGGC
CTCGGCGAGC ACGCGATCGA GCGCGCCGAG CGGATCGTCC GAGAGTTCGG CTATGTCGCC
TATGCGATGG ACGAATTCGG CGAGACGCCG GGCGACATGG ACGCGATCCT CGGCTGGATC
GGCAAGCTGC TGGGCGATCC GGCCGAGCTG CACGGCCGGC TGGCCGCCGC GCTGCGCGGG
CTGGCCGAGC AGCCGATGGT CGACCCCGAC CGGCTGGCGG CGATCGGCCA TTGCTTCGGC
GGCACCTCGG CGATCGAGCT GGCAGGGACG GGCGCGGACC TGAAGGCGAT CGTCGGCTTC
CACGCCGGCC TCCAGGGCAC CGGCCACGTC GATGCGGCCG CGATCCGCGG CAAGCTGCTT
ATCTGCAACG GCGCGCAGGA CCCGTTCGTG ACGCCGGAGA TCCTGCAGGC GTTCAGCAGC
GAGATGATCG CCGGCGGAGT CGATTGGCAG ATGAATCTCT ACGGCCGCGC CCGTCACAGC
TTCACCAACC GCGACGCCGA TGCGCTCGGA TCGGAGGCCT ATGCCTATGA TGCCGATGCC
GACCGCCGCT CGTGGGAGGC GATGCGCGCG CTGTTCCTCG AAGTGCTGGG CTGA
 
Protein sequence
MKSQDLTVVH NGTALTGRLI WDETRTGERP GVLVIHEATG LGEHAIERAE RIVREFGYVA 
YAMDEFGETP GDMDAILGWI GKLLGDPAEL HGRLAAALRG LAEQPMVDPD RLAAIGHCFG
GTSAIELAGT GADLKAIVGF HAGLQGTGHV DAAAIRGKLL ICNGAQDPFV TPEILQAFSS
EMIAGGVDWQ MNLYGRARHS FTNRDADALG SEAYAYDADA DRRSWEAMRA LFLEVLG