| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4145 |
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| Symbol | |
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| ID | 5199077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4557027 |
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| End bp | 4559240 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640583699 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001264623 |
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| Protein GI | 148557041 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.072691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.786094 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATACG GGAAGTGTGG CAGCTCTAAT GTGTTCAGGG CTTTTCTTCT GCTGACGACG
GCTTGCGCCG CCTCGGCGGC GATGGCCCAA AACTCCTCAG GGCCAGAGGC TTCTGTGCCT
GCTCCTTCGG GGGCATCTGC GGAAAACGCC GAGCCTGGGC CTCAAGACAT CATCGTCACA
GGGCGCCGAC GCAGCGAGTC CGCTTTCAAT GCACCGGTGG CCGTGTCGGT ACTGACGTCC
GGCGCCATAG AATCGTCAGG CGTCGCCCGG CCGGTCGACG TGACGCGGTT CGTTCCGAAC
ATGAACATCA CGAGCGTAGG GCGTGCAGGC GAAAATTTCG TGACACTCCG CGGCCTGGCG
CAGGCCCGTT CGGCCGACTC GATCGTCGCG GTCATCGTCG ACGGCGTCCA GTTGGCTTCC
GCGGAGGAGC TGAGTCAGGA ACTCTTCGAC ATCCAGCAGA TCGAGGTCCT CAAAGGGCCG
CAGGGCGCGC TCTATGGCCG TAACGCGATC GCCGGGGCGA TCGTAATCAA GACCAAGCCG
CCATCGGACA ATTTCGAAAC GAGCGCGACG ATCGGCTATG GCAACGGGAA TGCGTTCAAG
GCACTTGGTT CCGTCAACAT TCCGATTGCG AAGGATGGGG TGTATCTGCG CGCGGGCGCA
TTCCAGACGT CCAGGGACGG TTATTTCTTC GATCGGACGA CGCAACGCGA TGTCGACCCG
GCAAACGAGC GTGGCGTCCG AGCGCGCCTG GATATCGTTG CGATTCCGAA CCTGTCCGTG
AGCCTCCGAG GGAGCATGTC CAGGTTCATT GGGGCGGGCA TCAATTATCA CGCCCAACTC
GGGGCTCTCG ACACGAACGA TGCGACCCAG CCCTTCGTCA CCAACGTCAT CGGCCGTGAT
CGACAGAGGA AGCGGAGCGC GAGCGGCGTC TTTGATTACG ACCTGGGTTC GGGGCATGTC
GTCTTCACGC CCGCCTATTC CTATGTGCAC GAGTCGGTTT ACGGCGACGG ATTTCCTTAT
GCGGCGACCG CGGATACGAC ACAGCGTATC GAGTTCGTCG TGCGCACCAA GAGCGCCGAG
CTCAAATATA TATCCCCGCA GGACAGGGCG TTCAGCTATA TCGTTGGAGG CTATTGGGCG
AGCATCTTCC GCCGCGATAC CACGACACAG GGCATCGACA CGGGGCAGGG CGTGATCGAT
GGCCGGGGGC CGTTCCCGGC GGGCAGCATC AATCCCACGC TCTCGATCCA GGACGATGGC
TACCGCTACC GAGTTCTGGC GGGCTTTGGC CAAGCGAACC TGAAGCTCGG CGAGCGGGTC
AATTTGTCGG GAGCGATCCG CTACGACGAT GAGCGGAGAA GGCAGACGAA CCTCTCGCCA
CCGTCCTTCT CGCAATATAG CGGGCAGGTG CGTCGAAAGA CCTTCAAGGG CATCGAACCG
AAAGTCACCC TCAGCTACCA ACCTTCGTCG TTCGTCAACG TCTATGCCGA TTATGGCCAG
GGATTTGTCA GCGGCGGATT CAATCCCGCG CAGACCCGAG ATCTGGTGGT CGCGGCGGAT
CCGAACGCCA CCGTCCCGAA CGAATATGGG AAGCAGATCA ATCGGGCCGC CGAGATCGGC
GTGAAATTGC GACTTTTCGA CAATCGCGTC ACCGTCAACG CGGCGGCGTT CCACAGCAAG
GTGCGCAACT TACAGCAGTT CCAATTTTTC CCGGCCGCCA CGCTCCAGGC GATCAATCCG
ATCGACAAGA CCAAGATCGA TGGCGCCGAG TTCGACACCA CGACCAGATT GGGCCCCGTG
ACGATCTTTG CGGGCGCCGG TTACACCAAC GCTCGTATCG CCGCATATTC CGCCAACAGA
TCCTATCTGG GCAACAAGGT CCCCGGCGTT CCGAAATATA CCATCAACGC TGGAGCGCAA
TATGACGTTA CGCTCGGCTC CGATCTGAGC GCCAACGCGC GGATCGATTA TCAGCGGATC
GGACCGCAGT GGTTCGACAT TGCCAATACC TTTGGGACCA GGCGATCGGC GGTCAACCTG
TTCGACGCTC GGATCAACCT CGTCCACGAT CGTTGGACCT TCTCCGTTTT CAGCAAGAAT
ATATTCGACA AGCGATACAA TGCGGAAGCG GTCGTCATTT TTCCCACCGC CCAGGCCGTC
ACGCCGGCAT TGCCGCGGAC GTTCGGGGCC GAACTCAAAG TCGCTTTCAA ATAG
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| Protein sequence | MRYGKCGSSN VFRAFLLLTT ACAASAAMAQ NSSGPEASVP APSGASAENA EPGPQDIIVT
GRRRSESAFN APVAVSVLTS GAIESSGVAR PVDVTRFVPN MNITSVGRAG ENFVTLRGLA
QARSADSIVA VIVDGVQLAS AEELSQELFD IQQIEVLKGP QGALYGRNAI AGAIVIKTKP
PSDNFETSAT IGYGNGNAFK ALGSVNIPIA KDGVYLRAGA FQTSRDGYFF DRTTQRDVDP
ANERGVRARL DIVAIPNLSV SLRGSMSRFI GAGINYHAQL GALDTNDATQ PFVTNVIGRD
RQRKRSASGV FDYDLGSGHV VFTPAYSYVH ESVYGDGFPY AATADTTQRI EFVVRTKSAE
LKYISPQDRA FSYIVGGYWA SIFRRDTTTQ GIDTGQGVID GRGPFPAGSI NPTLSIQDDG
YRYRVLAGFG QANLKLGERV NLSGAIRYDD ERRRQTNLSP PSFSQYSGQV RRKTFKGIEP
KVTLSYQPSS FVNVYADYGQ GFVSGGFNPA QTRDLVVAAD PNATVPNEYG KQINRAAEIG
VKLRLFDNRV TVNAAAFHSK VRNLQQFQFF PAATLQAINP IDKTKIDGAE FDTTTRLGPV
TIFAGAGYTN ARIAAYSANR SYLGNKVPGV PKYTINAGAQ YDVTLGSDLS ANARIDYQRI
GPQWFDIANT FGTRRSAVNL FDARINLVHD RWTFSVFSKN IFDKRYNAEA VVIFPTAQAV
TPALPRTFGA ELKVAFK
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