| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4091 |
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| Symbol | |
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| ID | 5198928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4493831 |
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| End bp | 4496155 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640583647 |
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| Product | patatin |
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| Protein accession | YP_001264572 |
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| Protein GI | 148556990 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03607] patatin-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGAGA AGGAACTGCG GCTCGCGCTG GTCTGCTATG GCGGGGTCAG CCTGGCCGTG
TACATGCACG GGATCACCAA GGAGCTGTGG CGGCTCGCTC GCGCCAGCCG CGCCTTCCAC
GACGGGGCCG CCGCCTCGAC CGGCAGCGAG GCGATCTATC GCCGCCTGCT CGAACAGATC
GAGGCGGAGA AGGGCGTCCG CGTCCGCGCC CTGATCGACG TCATCGCCGG CGCCAGCGCG
GGCGGGCTCA ACGGCATCTT CCTCGGCCAT GCCGTCTCGA CCGGCCAGTC GCTCGAACCG
CTCACCACCC TGTGGCTGGA AAAGGCCGAT GTGGAGGTGC TGCTCGATCC CGACGCGCGG
CCGCTGCGCT GGTTCACCAA GCTGTGGGCG CTGCCCTTCG CCTGGATGCT GGCGCGCAAG
CGCGGCGGCA CGGTCGAGCG CACCGTGTCG GCCGAGACGC GGGCCGAGGT CCGCCGCAAG
CTGTCGGGCT TCGTCCGGGC GCGCTGGTTC CACCCGCCGT TCGGCGGCGT CACCTTCACC
AACCTGATCC TCGACGCCTT CGACGCGATG GCGAAGGGCC CCGTCGGGCC GCCGCTGCTG
CCCGATCGCC AGCCGCTCGA CGTCTCGGTC ACCGTCACCG ACTTCCACGG CTACGACCAG
CGGCTGCGGC TGCACAGCCC GGCGCTGGCC GAGGAGCGCG AGCATCGCCT GACGATCGGC
TTCACCGATC GCGGCATCGG CGAGCGGCGG CTCGCCGACC CGATCGAGCT GGCCTTCGCG
GGCCGCGCCA CCGCCAGCTT CCCCGGTGCC TTCCCGCCCT TCAACGTCGC CGAGATGGAC
AAGGTGCTGA AGGTCCGCAG GCGCGACTGG CACGGCCGCG AGGCCTTCCT CCACCGCATC
TTCCCCAGCG CGGCGGCGAG CGGCAGTCCC GAGGACCTGG TGCTGATCGA CGGATCGGTG
CTCGCCAACG CGCCCTTCGG CCCGGCGATC GACGCGCTGC GCAACCGCCC GGCGCGGCGC
GAGGTCGACC GGCGCTTCCT CTATCTCGAC CCGACCGCCA ACGCGCAGGC CCCGCCCGAG
CGGCACAGCG ACGGCGTCGT CCGCCTGCCC GGCTTCTTCG CGACCATCTT CGGCGCGATG
TCGACCATCC CGCGCGAGCA GCCGATCCGC GACAATCTCG AGCTGATCGA GCAGCGCTCG
GCCCGCATCG CCCAGACCAA GCGGATCATC GACGCGATCC GGCCGGAGGT CGAGGCGGCG
GTCGAGGCCG CGATGGGCCG GCAGATCCTG CTCTACCGCC CCAGCCCGGA GCGGCTCGGA
AGCTGGCGGT CGCGCGCGCA TGAGCAGGCC GCGCGCCAGG CGGGGTTCAC CTATGCCGGC
TACGGGCAGC TCAAGCTGTC GATCATCGCC AACGAGCTCG CCTCGACGAT CGCGCTGATC
GGCGGCGGCG ACGACGACAG CTTCCGCCAC GCGGCGCGGG CGGGGATCGG CGCCCATATG
CGCGACAAGG GCTTCGAGGA GCCCGACGCG CTCAGCGGCG GCGCCACCGC CGAGCCGCTG
CTCGAATTCT TTCGCCAGCA CGACCTCGGC TTCCGCATCC GCCGGCTGCG CTTCCTGGCC
GACCGGCTGA CCGAGATCGA GACCGGCAAC GGCGGCAGCG ACGAGGCGGC GCTCCAGGCC
GCGCGCGACG CGATCTACGG TTCGCTGGCG CCCTTCCTCA ACCTCCAGAT GCGCGATCAT
TATGAACGGC CGGTCGCCGC CGCCGCGCAG CATTTCGCCG GCGATCCCGC AACCGCGCTC
GCCAGCATCG CCGCGACCCG CGCGCTCGAG GCGCTCGACG TCGAGACCGA CCGGGCGATC
GCCGCGGTGC TGCCGCGCCT GTCCAGGACC GATCGCCGCA GCCTGCTGCT CGGCTATCTC
GGCTTCAGCT TCTTCGACCT CGCCACCCTG TCGCTGATGC GGCTGCAGGG CGCGCAGGAA
TTCCACGCCA TCCAGGTCGA CCGCATCTCC CCCGACGATT GCGCGTCGAT CCGGGGCGGC
GGCGCGGCGG CGACGCTCAG GGGGATCGAG TTCAACCTGT TCGGCGCCTT CTTCAGCCGC
GCCTATCGGG AGAACGACTA TCTGTGGGGC CGCCTCCATG GCGCCGAGCG GATGATCGAC
GTGCTGATCT CGACCATCCC GGCGGGCGAG ACCCTCGCCG AGGAGGACGT CGTCGCCGTC
AAGCGCCGCC TGTTCCACGC GATCCTCGAC GAGGAGCGCG ACCGGCTGAA GACGATTCCC
GACCAGATCG CGACGATCGA GAGCGAGATC GGACCGAGCA CGTAA
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| Protein sequence | MREKELRLAL VCYGGVSLAV YMHGITKELW RLARASRAFH DGAAASTGSE AIYRRLLEQI
EAEKGVRVRA LIDVIAGASA GGLNGIFLGH AVSTGQSLEP LTTLWLEKAD VEVLLDPDAR
PLRWFTKLWA LPFAWMLARK RGGTVERTVS AETRAEVRRK LSGFVRARWF HPPFGGVTFT
NLILDAFDAM AKGPVGPPLL PDRQPLDVSV TVTDFHGYDQ RLRLHSPALA EEREHRLTIG
FTDRGIGERR LADPIELAFA GRATASFPGA FPPFNVAEMD KVLKVRRRDW HGREAFLHRI
FPSAAASGSP EDLVLIDGSV LANAPFGPAI DALRNRPARR EVDRRFLYLD PTANAQAPPE
RHSDGVVRLP GFFATIFGAM STIPREQPIR DNLELIEQRS ARIAQTKRII DAIRPEVEAA
VEAAMGRQIL LYRPSPERLG SWRSRAHEQA ARQAGFTYAG YGQLKLSIIA NELASTIALI
GGGDDDSFRH AARAGIGAHM RDKGFEEPDA LSGGATAEPL LEFFRQHDLG FRIRRLRFLA
DRLTEIETGN GGSDEAALQA ARDAIYGSLA PFLNLQMRDH YERPVAAAAQ HFAGDPATAL
ASIAATRALE ALDVETDRAI AAVLPRLSRT DRRSLLLGYL GFSFFDLATL SLMRLQGAQE
FHAIQVDRIS PDDCASIRGG GAAATLRGIE FNLFGAFFSR AYRENDYLWG RLHGAERMID
VLISTIPAGE TLAEEDVVAV KRRLFHAILD EERDRLKTIP DQIATIESEI GPST
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