Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4089 |
Symbol | |
ID | 5198926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4492795 |
End bp | 4493475 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640583645 |
Product | orotidine-5'-phosphate decarboxylase |
Protein accession | YP_001264570 |
Protein GI | 148556988 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.691507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCA GCCCCATCTA TGTGGCGATC GACACGCCCG ACATCGCCCG CGCCAGGGAG ATCGCCGCGC GCGTCCGCAA CCATGTCGGC GGGATCAAGC TGGGGCTCGA ATTCTTCTCG GCGCATGGCC AGGCCGGGGT GCGGGAGATG GCGGCGCTCG ACCTGCCCGT CTTCCTCGAC CTCAAGCTCC ACGACATCCC CAACACCGTC GCCAAGGCGG TGCAGGCGCT CGCGAGCCTG AAGCCCGCGA TCCTGACCGT CCACGCGGCC GGCGGGCTGG CGATGATGGA GGACGCCAAG GCGGCGGCCC CGGCCGGCAC CAAGGTCGTC GCGGTGACCG TGCTCACCAG CCTCGACGGC AACGACCTCG ATTCGATCGG CGTCGCCCCC GACACCCATG CCCAGGTCGA GCGGCTCACC CTGCTCGCCA GGCAGGCCGG GCTCGACGGC GTGGTCTGCT CGGGCAACGA GGTGAAGGCC GCCCGCAAAT TGTGGCCGCA GGGCTTCTTC GTCGTCCCCG GCATCCGTCC GGCCGACGGC AACGGCCATG CCGACCAGAA GCGCGTCATG ACGCCGCGCC AGGCGCTCGA CCAGGGCGCC TCGATCCTCG TCATCGGCCG CCCGATCACC CAGGCCGAGG ACCCCGACCA CGCCGCCCGC GCGATCGAGG CGACGCTCTG A
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Protein sequence | MTRSPIYVAI DTPDIARARE IAARVRNHVG GIKLGLEFFS AHGQAGVREM AALDLPVFLD LKLHDIPNTV AKAVQALASL KPAILTVHAA GGLAMMEDAK AAAPAGTKVV AVTVLTSLDG NDLDSIGVAP DTHAQVERLT LLARQAGLDG VVCSGNEVKA ARKLWPQGFF VVPGIRPADG NGHADQKRVM TPRQALDQGA SILVIGRPIT QAEDPDHAAR AIEATL
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