Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4084 |
Symbol | |
ID | 5200307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4484194 |
End bp | 4485339 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640583640 |
Product | hypothetical protein |
Protein accession | YP_001264565 |
Protein GI | 148556983 |
COG category | [S] Function unknown |
COG ID | [COG3535] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.3135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCATCA TTCGAGAGCT GCAGGAAGTC CGGGACATGG CGCGCGGCGC CGTGCTGCTG GGAACGGGCG GCGGCGGCGA CCCCTATATC GGCGAGCTGT TCGTGGGCGA GCAGATCAAG CGGGGCAATT TCCCGAAGGT CATCGGGGCC GACGAGCTGG AGGACGACGC CTTCGTGCTG TCGATCGCCG GCGTCGGCGC GCCGACCGTC GGCAGCGAGA ACCTGATCAG CGAGAAGATG CTGATGCGCC TGCTCGCCTA TGCCGAGGCG CATTTCGGCC GGCGGGTCGA CGCGCTGATC AGCGCCGAGA TCGGCGGCTC GAACTCGATC ATGCCGCTGG CGCTGTCGGC GATCAGCGGC GTCCCCGTGC TCGACGCCGA CGGCATCGGG CGGGCGATGC CGCAGATCGA GATGACGACG TTCAGCATCT ATGGCTGCCC GGCCAGCCCC TGCATCCTGA CCGACGCGCT GGGCAATGTC GTGACGGTCG ACGCGATCAG CGACCGCAAG GTGGAGGACA TCTGCCGGGC CGTCGCCAGC GCGCTGGGCG CGCACGTCAC CAGCGCGATC TATCCGATGA CCGGCAAGCA GGCGCGCGAG GTGGCGGTGC AACGGTCGCT GAGCCTCGCC TACGGGATCG GCCGGTGCAT CCGCACCGCG CGCGAGAGCT CGTCGAACAT CTTCGACGCG CTGCTCGCCT ATCTGAACGA CTGGGATGGC CGCCACGCGC GGATATTGTT CGACGGCAAG ATCACCGACG TGATCCACGA GACGCGCGAC GGCTGGCATT GGGGACAGGC GACGCTGAGC GGCCTGGGCG ACAATCGCGA CGAGTGCGTC ATCGAGATCC GCAACGAGTT CCTGATCGCC CGGGTGAACG GCGAGCCGGT GGCGATGGTC CCCGACCTGA TCACCGTGCT CGACCGCGAG ACGGGGGAGC CGCTGACCGG CAGCATGCTC GCCTATGGCC AGCGCGTGAA GGTGCTCGGC TATGCGGCCG ATCCGATGCT CTGCCGGCCC GAGGCGCTCG AGGTCGTCGG GCCGCGCATG TTCGGCATCG ACCTCGATTT CGTGCCGCTC GCACAGAGCG CCGCCGCCGC GTCGCGCGTC GGCGCCAAGG CGACGGCTTC CGACCCGGTG GCCTGA
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Protein sequence | MFIIRELQEV RDMARGAVLL GTGGGGDPYI GELFVGEQIK RGNFPKVIGA DELEDDAFVL SIAGVGAPTV GSENLISEKM LMRLLAYAEA HFGRRVDALI SAEIGGSNSI MPLALSAISG VPVLDADGIG RAMPQIEMTT FSIYGCPASP CILTDALGNV VTVDAISDRK VEDICRAVAS ALGAHVTSAI YPMTGKQARE VAVQRSLSLA YGIGRCIRTA RESSSNIFDA LLAYLNDWDG RHARILFDGK ITDVIHETRD GWHWGQATLS GLGDNRDECV IEIRNEFLIA RVNGEPVAMV PDLITVLDRE TGEPLTGSML AYGQRVKVLG YAADPMLCRP EALEVVGPRM FGIDLDFVPL AQSAAAASRV GAKATASDPV A
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