| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4053 |
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| Symbol | |
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| ID | 5196410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4455717 |
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| End bp | 4456766 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583610 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001264535 |
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| Protein GI | 148556953 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.861449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAGA TGCGATCGAT CACCGGCGAC GCCGGGGTCG CCGCGCCGGC CCTGGACGGC
GAGCGGCGGC TGGGGCGGCT CGCGGCGATG CTGTCGGTGC CGGCGCTGCT GCTCGCGACC
GGCCTCTATC TGTGGCTCAC CGGCGGCCGG ACCGTCTCGA CCGACAATGC CCAGGTCAAC
GCCCATGTCG TGGAGGTCAG CGCCGAGGTC GCCGGCCGCA TCACCGACGT CTATGTGAGC
GAGAACCAGC TCGTGAAGAA GGGCGACCTG CTCTTCCGCG TCGACCCCCA GCCCTATCGC
ATCGCGCTGA TGCAGGCCGA GGCCGCGGTC GGCAATGCCG AGCTGACCGT CGCCCAGCTC
GAGAGCACCT ATCACGCCAA GCAGGCCGAC ACCGCCAAGA GCCTGTCGGA CGTCAGCCTC
GCCCGCGACA CCTTCGCCCG GCAGCAGGAG CTGCTCGCGC GCGGCTTCAC CACCCGCGCC
GCCTTCGACG CCGCCAAGGC CGCGCTCGCC GCCGCGCAGG CGCAGCAGGC CTCGGCCAGG
TCCGAAGCCG AATCGGCGCG CGCCGTGATC GGGACGTCGC GCAACGGCGG CCACCCGCAG
ATCGAGGCCG CGATCGCCGC GCGCGACAAG GCCGCGCTCG ACCTCGCCCG CACCGAGATC
CGCGCGCCGA TCGAGGGCCG GATCAGCCAG GCCGACAAGC TCCAGCCCGG CACCATGGCG
ATCCAGATGC TGCCGATGGT CAACGTCGTC AGCAACCAGG GCTATTGGAT CGACGCCAAT
TTCAAGGAAA CCCAGCTCGA CAAGGTCCGC ATCGGCCAGC GCGCGGACAT CGAGCTCGAC
GCCATTCCCG GCCGGACCAT CAAGGGCCAT GTGATCGGCA TCAACGCCGG CACCGGCTCG
CAATTCTCCC TGCTGCCGCC GCAGAATGCG ACCGGCAACT GGGTGAAGGT CACCCAGCGC
GTCCCCGTCC GCATCCAGAT CGACGACCGG CTCGACCGTC CGCTCGTCGC CGGCTGGAGC
GCCCATGTCA CGGTACACGT CGCCGATTGA
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| Protein sequence | MNEMRSITGD AGVAAPALDG ERRLGRLAAM LSVPALLLAT GLYLWLTGGR TVSTDNAQVN
AHVVEVSAEV AGRITDVYVS ENQLVKKGDL LFRVDPQPYR IALMQAEAAV GNAELTVAQL
ESTYHAKQAD TAKSLSDVSL ARDTFARQQE LLARGFTTRA AFDAAKAALA AAQAQQASAR
SEAESARAVI GTSRNGGHPQ IEAAIAARDK AALDLARTEI RAPIEGRISQ ADKLQPGTMA
IQMLPMVNVV SNQGYWIDAN FKETQLDKVR IGQRADIELD AIPGRTIKGH VIGINAGTGS
QFSLLPPQNA TGNWVKVTQR VPVRIQIDDR LDRPLVAGWS AHVTVHVAD
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