| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4030 |
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| Symbol | |
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| ID | 5197155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4432811 |
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| End bp | 4434052 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640583587 |
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| Product | Orn/DAP/Arg decarboxylase 2 |
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| Protein accession | YP_001264512 |
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| Protein GI | 148556930 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR03099] pyridoxal-dependent decarboxylase, exosortase system type 1 associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.157056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACCGA CCGGACCGAT ACCTCCCGAT TTCCCATGGC GGGACGGCGC GCTGATGATC
GGCGGGCGCA GCGCCGACGA ATGGATCGCG GTCGCGGGCG ACACGCCGCT GTTCGTCTAC
GACCTCGCCG TCGTCCGCGA CCGCATCGCC CGGTTCCGGG CGGCGTTCGC CGGCGTGTCG
CTCCATTATG CGGTGAAGGC CAATCCGCAT CCGCCGCTGG TCGCCGCGAT CGCGCCGCTG
GTCGATGGGA TCGACGTCGC CTCGGCGGGC GAGGCGCAAC TCGCGCTCGA CGCGGGGATG
GACGCGCGCC GCATCTCCTT CGCGGGTCCC GGCAAGCGCG ATCGCGAACT GGCGATGGCG
ATCGAAGCCG GCATCACCCT CAACCTCGAA TCGGAAGGCG AGGCGGAGCG CGCGCTGGCG
ATCGGGCGCG GCATCGGCCG CACCCCGCGC CTCGCGCTGC GGATCAACCC CGATTTCGAG
CTGAAGGGAT CGGGGATGAA GATGGGTGGC GGCGCCAAGC CCTTCGGCGT CGATGCGGAG
CGCGCCGCCC CGATCATCCG CCGGATCGTC GAGGCGGGCG CCGACTATCG CGGCCTCCAC
ATCTTCGCCG GCTCGCAGGC GCTCGACGCC GATGCGCTGG TCGAGGCGCA GCGCTCGGCG
CTGGCGCTCG CCGCGCGGGT GAGCGTCGAG GCCGGAGTCG CCCCGCCGCA CGTCAATCTG
GGCGGCGGCT TCGGCATCCC CCATTTCGCC AACGACGCCC GATTAGACGA AAGTAGGGTG
GGCGGCGCAT TATCCTCGGC GCTCTCGCGA CGCGACCCGA TCCTTGCCGA GGCAGAGTTT
ACAATCGAAC TGGGGCGCTG GCTGGTGGGG GAGGCGGGGG TCTATCTGAC CCGCATCGTC
GATCGGAAGG CCAGCCATGG CGAGACCTTC CTGGTCGTCG ACGGCGGGCT CCACCACCAG
CTCGCCGCCA GCGGCAACTT CGGTACGGTG GTGCGCCGTA ACTATCCGAT TTCTTTGACG
AAATATTCGG ATTCGGTTAA GGTCGAGGAG GTGACGGTGG TGGGTTGTCT CTGCACCCCG
ATCGATCGGC TCGGCGACCA TGTCGGCTTG CCGGAGGCGA AGGTCGGCGA CGTGGTCGCG
CTGTATCTGG CGGGCGCCTA TGGGGCGAGC GCCAGTCCGC AGGCCTTCCT CGGCCATCCG
TCGCCGCTCG AAATAACGAT AGACGGGACC CGTATCCTGT GA
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| Protein sequence | MKPTGPIPPD FPWRDGALMI GGRSADEWIA VAGDTPLFVY DLAVVRDRIA RFRAAFAGVS
LHYAVKANPH PPLVAAIAPL VDGIDVASAG EAQLALDAGM DARRISFAGP GKRDRELAMA
IEAGITLNLE SEGEAERALA IGRGIGRTPR LALRINPDFE LKGSGMKMGG GAKPFGVDAE
RAAPIIRRIV EAGADYRGLH IFAGSQALDA DALVEAQRSA LALAARVSVE AGVAPPHVNL
GGGFGIPHFA NDARLDESRV GGALSSALSR RDPILAEAEF TIELGRWLVG EAGVYLTRIV
DRKASHGETF LVVDGGLHHQ LAASGNFGTV VRRNYPISLT KYSDSVKVEE VTVVGCLCTP
IDRLGDHVGL PEAKVGDVVA LYLAGAYGAS ASPQAFLGHP SPLEITIDGT RIL
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