| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4018 |
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| Symbol | |
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| ID | 5198626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4420691 |
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| End bp | 4421248 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640583576 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001264501 |
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| Protein GI | 148556919 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.968841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCCGGTCA AGCTCATCCA TACCCGTCGT TTCGGCGATG ATCGGGGGTG GTTCTCGGAA
ACCTATCATC GCCCGCGTTG GACCGCCGAC GGCGCGGCGG AAGAGTTCGT TCAGGACAAC
CACAGCTATT CGAAGCATGC CGGCACGCTG CGCGGCATCC ATTTTCAAGC GCCGCCGCAC
GCGCAGGCCA AGCTGGTCCG CTGCATCCGC GGCCGGATTC TCGACTATGC GGTCGATTTG
CGCGCCGGGT CGCCGACCTA TGGCCGCCAC GTTGCCGCCG AGCTGTCGGC CGACAATGGC
GACCAGCTTT ATATTCCGGT CGGCTTCGGC CACGCCTTCG TGACGCTCGA GCCCGACAGC
GAGGTGATCT ACAAGGTGTC GGACGTCTAT GCGCCCGATG TCGACGGCGG CATAAGCTGG
GATTGCCCGA CGCTCGCGAT CGACTGGCCG CTGCCGCCCG GCGGGCCGGT GCTGTCGGAC
AAGGACAGGA CGTTGCCGCA TCTCGCCGAC TGGGATAGCC CGTTCGCCTA TGACGGCGCG
CCGCTGCGGC CGCTCTGA
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| Protein sequence | MPVKLIHTRR FGDDRGWFSE TYHRPRWTAD GAAEEFVQDN HSYSKHAGTL RGIHFQAPPH
AQAKLVRCIR GRILDYAVDL RAGSPTYGRH VAAELSADNG DQLYIPVGFG HAFVTLEPDS
EVIYKVSDVY APDVDGGISW DCPTLAIDWP LPPGGPVLSD KDRTLPHLAD WDSPFAYDGA
PLRPL
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