Gene Swit_3998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3998 
Symbol 
ID5200822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4387733 
End bp4388701 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content70% 
IMG OID640583556 
Productmethyltransferase type 11 
Protein accessionYP_001264481 
Protein GI148556899 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.345535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGACC CCTCGCGTTT CGAGCCGGCC ACCGACGAGA ATTTCGTCGA GCAGCTCTAC 
CTTGCCGCCA ATCCCGACGT CGCGCGCCAT GTCGCGGCGG GCGGCGACGC CTGGAAGCAT
TTCGAGCGCC ACGGCCGCAA GGAGGGCCGC CGGCAACTCA CCCGCGCCGC CGCCGGCCTG
CCCGGCACCC GCGCCGAAGC CAAATATGCC CGCTTCGCTC CGCTGCTCGA CGCAGGACGC
GGCGCGGGCG GCGATTTCCG CTTCCTCGGC GCGGCGGACA GCTTCCCGAT CGGCTATGGC
GCGGCCGCGC ACGACCTGGG CGACTATGAC GGCGAATCGG CCAATCCCGG CTTGAGCGAC
TTCGTCGAGA CGGTGCGCGC CAACCCGGAC AAGCTCTATC TCGACGTCGG CTGCGGCCGC
CGCTCGCGGA CCTTCGACAA TTGCCTCTAT CTGGAGGTCT ATCCCTCGGT CAGCGCCGAC
CTGGTCATCG CGCCCGCCTG CCGCTACCCG ATCGCCGACG CCTCGCTCGA CGGGATCGGC
TGCTTCGCGG TGATGGAGCA TATGGCCGAG CCCTGGGTCG CCGCCGCCGA GTTCGCGCGG
ATGCTCAAGC CCGGCGGGAT GGTGTTCATC GACTATCCCT TCCTGGTGCC GGTCCACGGC
TATCCCTCCC ATTATTACAA CGCGACCCGC GAGGGGCTGG CGCGGCTGTT CGACGCGGGG
TTCGAGCGGG TCAAGCTGGC GACCGAGGGC AACCAGACCC CCGACCATGC GCTCCACTGG
CAGCTCGGCG GGCTGGCCGA GGCACTGACC GACGACGCGC TGCGCGACGA GCTGAAGGCG
ATGAGCGTCG GCGAGCTGAT CGCCCAGCCG CCCGGCGGGC CCTTCTGGCA ACGGGTGCTG
GCGGCGACGC CCGAACCGGC CCGCGCCATG TTCGCCGCCG GCAACACGCT GATCGCGCGC
AAGCTGTAG
 
Protein sequence
MQDPSRFEPA TDENFVEQLY LAANPDVARH VAAGGDAWKH FERHGRKEGR RQLTRAAAGL 
PGTRAEAKYA RFAPLLDAGR GAGGDFRFLG AADSFPIGYG AAAHDLGDYD GESANPGLSD
FVETVRANPD KLYLDVGCGR RSRTFDNCLY LEVYPSVSAD LVIAPACRYP IADASLDGIG
CFAVMEHMAE PWVAAAEFAR MLKPGGMVFI DYPFLVPVHG YPSHYYNATR EGLARLFDAG
FERVKLATEG NQTPDHALHW QLGGLAEALT DDALRDELKA MSVGELIAQP PGGPFWQRVL
AATPEPARAM FAAGNTLIAR KL