| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3987 |
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| Symbol | |
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| ID | 5198705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4377028 |
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| End bp | 4377957 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583544 |
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| Product | hypothetical protein |
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| Protein accession | YP_001264470 |
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| Protein GI | 148556888 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2510] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.279152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCATA CCCGCATGGC CGGTTCCCAG CCCCGTTCCT CCCACGCCCT GCAAGGCATC
CTGCTGCGCT CGATCGCGGT CGTCTTCTTC GCGCTGATGA GCGCGGCGAT GAAATGGGCG
AGCGAGGGCG GCGCGAGCCT GGTCGAGCTG GTCTTCTTCC GCTCGGCGGT CGGCTTGCCG
GTGACGCTCG CCTGGCTCGC ATTGGGGCCG GGCATCGGCG CGGTGCGGAC GAAGCGCCCT
GGCGCCCACC TGCTCCGCTC GATGATCGGC ATGGTCTCGC TGACGATGCT CTACCAGGGG
CTGATGCTGC TGCCGATCGC CGACGCGGTG ACGATCGGCT TCTCGGCGCC CGCCTTCGCG
ACGCTGCTGT CGGTGCTGGT CCTGCACGAG AAGGTCGGTC CGCACCGCTG GGCCGCCGTC
GCGATCGGCT TCCTCGGCGT GTTCATCGTC GCCCGGCCGT CGGGCAGCGC GCTGCCGCTC
GCCGGTATCG TCTATACATT ATTGGGCGCC GCCGCCTCGG CCGCCGCGAC GGTGACGATC
CGCGAGATGA GCCGGGTCGA GACGCACGGA TCGATCGTCT TCTGGTTCTT CCTCTCGACG
ACTTTGGTCA GCGGCGTCGG AATGCTCTTC CACAGCGCGC CGCATCCGCC CTTCACCTGG
GCGCTGCTGC TGTTCGGCGG CGTGACCGGG GCGGCGGCGC AATTGCTGCT GACCCGCGCG
CTGCAGGTCG CGCCGGTGTC GGTCGTCGCG CCGTTCGACT ATACCCAGAT CATCTGGGCC
GCGCTGCTCG GCTGGCTGAT CTGGTCGACC CTGCCCGGCC TCAACACCGC GATCGGCGCG
GCGCTGATCA TCGCCAGCGG ACTCGCCACC GCCTGGCGCG AGCACCGGCT GCACAAGGAC
ATGGTCGCGG CGACGCCGCC GATCGAATAG
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| Protein sequence | MAHTRMAGSQ PRSSHALQGI LLRSIAVVFF ALMSAAMKWA SEGGASLVEL VFFRSAVGLP
VTLAWLALGP GIGAVRTKRP GAHLLRSMIG MVSLTMLYQG LMLLPIADAV TIGFSAPAFA
TLLSVLVLHE KVGPHRWAAV AIGFLGVFIV ARPSGSALPL AGIVYTLLGA AASAAATVTI
REMSRVETHG SIVFWFFLST TLVSGVGMLF HSAPHPPFTW ALLLFGGVTG AAAQLLLTRA
LQVAPVSVVA PFDYTQIIWA ALLGWLIWST LPGLNTAIGA ALIIASGLAT AWREHRLHKD
MVAATPPIE
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