| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3918 |
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| Symbol | |
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| ID | 5196241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4300698 |
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| End bp | 4302884 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640583474 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001264401 |
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| Protein GI | 148556819 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.665207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGTC CGTTCCGTAT CGCCGCATCT GTCTCGGCAC TCGCCATCGC CATGCCCGCC
CTGGCCCAGG TCTCGCCTGA CGCCGCTACC GAAACGGCGA AGGACGACAT CGTCGTCACC
GCCGCGCGCA GCATCCTGCC GGCCAATGCC CTGCCGCTGA CCATCGACAT CGTCGGCAAG
TCCGAGCTCG ACCAGCAGAT GTCGATCTCC GGATCGGTGA TCGATTCGAT CGCGACGCTG
ACCCCGTCCT TCTCGCCGAC CCGGCAGAAG ATGTCGGGCG CGGGCGAGAC GCTGCGCGGC
CGCTCGCCGC TCTATGCGAT CAACGGCATC CCGCAGACCA CCCCGCTGCG CGACGGCAGC
CGCGACGGCT TCACGATCGA CGGTTTCTTC ATCGACCGGG TCGAGGTGAT CTACGGCTCG
AACGCGCTGC AGGGTGTCGG CGGCACCGGC GGTATCGTCA ACCAGGTCAC GGTCGCGCCG
CCGACCGCCG AGGGGTTCGG CGGCCGGGTG CTGCTGCAGG GCAATGCCGA CAATGATTTC
CGCAAGGACG GCCTGGGCGG GAAGGCCGCC GGCCTGGTCC AGTATCGCAA GGACTGCTTC
GACGCGACGG TCGGCGCGGC CTATGAGAAG CGGGCGGTCT TCTACGACGG CGACGGCCGC
CGGGTCGGCG TCAACCTGAC CCAGGGCGAG ACGCAGGATT CGAAGACCCT CTCGCTGTTC
GGCCGGTTCG GCTACCAGCT CGGCGATACC GGCCGGATCG ACCTGATCGC CAGCCGCTAC
GAGATGAAGG TCGACGGCGA CTATATCGCC GTGGCGGGCG ACAAGACGGC CGGCCTGCCG
ACCAGCGCCA CGCGCGGCAA CCCGCCGCTC AAGCCCGCCG AGAGCCGCAC CGAAAGCGTC
GCGCTTTCGG TCACCGACAC CGATCTCGGC GGCGGCAACT TCGTCAGCCA GCTGTTCTTC
AACCGGACCC GCGACACCTT CGGCGGCGAG CCGGTCACGC AGGCGACCTT CCAGGACCCG
ACGATCGCGC CGGTCGGCAC GCTGTTCGAC CAGTCGCAGA ACCGGTCGCG CAAGCTCGGC
TTCAAGATCA GCTATGAGCG CGCGGTTCCC GGTTTCGAGG CGTTGACCGG CACGCTCGGC
TTCGATGCGC TGTTCGACAA GACCGAGCAG CGGCTGATCG CCACCAACCG CGTCTGGGTG
CCGCCGAGCG ATTTCCGCAG CCTCGCGCCC TTCGCCCAGC TCAACCTGGC GCTGTTCGAC
GAGAAGCTCC GCCTGGCGGG CGGCGCGCGC TGGGAGAATG TCCAGATCAG GATCGACGAC
TTCCAGACGC TCGCCTCGAC CACGGTGACG ACGGCCAATC CGAACGCTTA TGGCGGCGTC
ATGGTCGGCG GCGGCAAGCC GAAGTTCGAC GACGTGCTGC TCAACGGCGG CATCATCTTC
GAGCCGTGGA AGGGCATCCG CGCCTATGCC AGCTATGCCG AGGGCTTCAC CGTCGCCGAC
ATCGGGCGCA TCACCCGGGC GATCGGCAAG CCCGGCATCG ACCTCGACAA TTATCTCGAC
ATCAGCCCGG TCATCTCGAA CAACCGCGAG ATCGGCGTCG AGGTGAAGCG CGGGCCGCTC
GATACCAGCG TCACCTATTT CTGGTCGTCG AGCAACAAGG GCCAGGTGCT GGTCAACGGC
GGCGCCGGCA TCTTCAACGT GATCCGCCAG CGGGTCGAGA TCGAGGGGCT GGAGGTCAAC
GCCGGGGTCC GCATGCCGAT CGACGGGCTC AGGCTGTCGG TGGGCTATGC CCATATCAAG
GGCCGCTACG ATGCCAGCGC GACGCCCGAC GGCACGGCGG GGACCGACCT CGACGGCGCC
AACATCTCGC CCGATCGCCT GAACCTGGCG GCCAGCTTCA ACCGGGGCGC GGTCTCGGCG
CGGGTGCAGA CCAACTTCTA TCTGAGCCGG ACCTTCCGGA GCAGCGAGAT CGTGCTCGAT
CCACGCAACA GGTTCGGCGG TTATGACCTG ACCGATGCGA GCATCCGCTA CCAGACCGGC
CTGGGCGGGT TCACCTTCTC GGTCCAGAAT CTTTTCGACA AGCAATATAT CGACTACGCG
TCCGCCACGC AGCGCCCGAC CGACAATTTC TTCAACTTCG CCGGGCGCGG CCGCAACTTC
ACGCTTAGCT GGGACTATCG CTTCTGA
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| Protein sequence | MIRPFRIAAS VSALAIAMPA LAQVSPDAAT ETAKDDIVVT AARSILPANA LPLTIDIVGK
SELDQQMSIS GSVIDSIATL TPSFSPTRQK MSGAGETLRG RSPLYAINGI PQTTPLRDGS
RDGFTIDGFF IDRVEVIYGS NALQGVGGTG GIVNQVTVAP PTAEGFGGRV LLQGNADNDF
RKDGLGGKAA GLVQYRKDCF DATVGAAYEK RAVFYDGDGR RVGVNLTQGE TQDSKTLSLF
GRFGYQLGDT GRIDLIASRY EMKVDGDYIA VAGDKTAGLP TSATRGNPPL KPAESRTESV
ALSVTDTDLG GGNFVSQLFF NRTRDTFGGE PVTQATFQDP TIAPVGTLFD QSQNRSRKLG
FKISYERAVP GFEALTGTLG FDALFDKTEQ RLIATNRVWV PPSDFRSLAP FAQLNLALFD
EKLRLAGGAR WENVQIRIDD FQTLASTTVT TANPNAYGGV MVGGGKPKFD DVLLNGGIIF
EPWKGIRAYA SYAEGFTVAD IGRITRAIGK PGIDLDNYLD ISPVISNNRE IGVEVKRGPL
DTSVTYFWSS SNKGQVLVNG GAGIFNVIRQ RVEIEGLEVN AGVRMPIDGL RLSVGYAHIK
GRYDASATPD GTAGTDLDGA NISPDRLNLA ASFNRGAVSA RVQTNFYLSR TFRSSEIVLD
PRNRFGGYDL TDASIRYQTG LGGFTFSVQN LFDKQYIDYA SATQRPTDNF FNFAGRGRNF
TLSWDYRF
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