| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3911 |
|---|
| Symbol | |
|---|
| ID | 5200825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 4295278 |
|---|
| End bp | 4296093 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640583467 |
|---|
| Product | exodeoxyribonuclease III |
|---|
| Protein accession | YP_001264394 |
|---|
| Protein GI | 148556812 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0708] Exonuclease III |
|---|
| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGACG GACGCCTCCG GGCACGCTAT CCCCGCCGCA TGAAGATCGC GACCTTCAAC
ATCAACGGGA TCAAGGCCCG TCTCCCCCGC CTCGTCGAAT GGCTCGAGCA GAAGGCGCCC
GACGTCGCCT GCCTGCAGGA GATCAAGACC TCCGACGAGA CCTTCCCGAT CGCCGAGATC
GAGGCCGCCG GCTATGGGGC GATCTGGCAC GGGCAGAAGG GCTTCAACGG CGTCGCGATC
CTCGCCAAGG GGGCGCAACC GGTCGAGCGG CGCAAGGGCC TGCCCGACGA TCCCGATCCC
AGCCACAGCC GCTATATCGA GGCGGAGGTG AACGGCGTGG TCGTCGCCTC GATCTACCTG
CCCAATGGCA ATCCGGCGCC GGGCCCGAAG TTCGATTACA AGCTCGCCTG GTTCGACCGG
CTGATCGACC ATGCCGCCGA TCTGTGGGCG GGCGAGATGC CGGTGGTGCT GGCCGGCGAC
TATAACGTCA TCCCGACCCC GTCGACCGAC GACGTCTTCT CCGAACGGGC GATGGCGAGC
GACGCGCTGA CCCAGCCCGA GAGCCGCGCC GCCTTCCGCC GGCTGTGCAA CGCGGGCTGG
ACCGACGCGG TACGGACGAT CCATCCGCAC GGGCCGGTCT ACACCTTCTG GGACTATCAG
GCCGGCGCCT GGCAGCGCGA CGCCGGCTTC CGCATCGACC ATCTGATGCT GAGCCCCGCC
GCCGCCGACC GGCTGACCGG CGCCGGGGTC GACAAGGACA CCCGCGCGCT GGAGAAGGCC
AGCGACCACG CGCCGACCTG GATCACGCTG CGCTGA
|
|---|
| Protein sequence | MDDGRLRARY PRRMKIATFN INGIKARLPR LVEWLEQKAP DVACLQEIKT SDETFPIAEI
EAAGYGAIWH GQKGFNGVAI LAKGAQPVER RKGLPDDPDP SHSRYIEAEV NGVVVASIYL
PNGNPAPGPK FDYKLAWFDR LIDHAADLWA GEMPVVLAGD YNVIPTPSTD DVFSERAMAS
DALTQPESRA AFRRLCNAGW TDAVRTIHPH GPVYTFWDYQ AGAWQRDAGF RIDHLMLSPA
AADRLTGAGV DKDTRALEKA SDHAPTWITL R
|
|---|
| |