Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3889 |
Symbol | |
ID | 5200289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4276632 |
End bp | 4277060 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640583444 |
Product | PilT domain-containing protein |
Protein accession | YP_001264372 |
Protein GI | 148556790 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGTCC TCGACACCAA TGTCGTCTCC GAGGCGATGA AGCCTGAACC GAACCCGGAC GTGTGCGCCT GGCTCGATGA GCAGGCGGCG GAGACGCTCT ATCTTTCGAG CGTGACGATC GCGGAACTGC TGTTCGGTAT CGGCGCGCTT CCCGACGGCC GGCGCAAGGA CAGGCTGGCC GTGGCCTTGG ACGGGCTGCT CGAGCTGTTC GACGGGCGGA TCCTGCCCTT CGACATGGCC GCCGCCCGTC ATTATGCCGA TCGCGCGGTC AGGGCGCGCA GTGCCGGCAA GGGATTTCCA ACGCCGGACG GATATATCGC CGCCATCGCG GTCTCCCGCG GCTTCGTCGT GGCGACCCGG GATGCCAGCG CATTCGACGC CGCCGGAATC GCCGTCATCG ATCCCTGGAA GGCCGATCGG CGGCAATAG
|
Protein sequence | MIVLDTNVVS EAMKPEPNPD VCAWLDEQAA ETLYLSSVTI AELLFGIGAL PDGRRKDRLA VALDGLLELF DGRILPFDMA AARHYADRAV RARSAGKGFP TPDGYIAAIA VSRGFVVATR DASAFDAAGI AVIDPWKADR RQ
|
| |