| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3876 |
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| Symbol | |
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| ID | 5196184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4264021 |
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| End bp | 4265709 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640583431 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_001264359 |
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| Protein GI | 148556777 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.112326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACA TCACCGCAAC CGCTTCGCAC TTCCAGGCGC ATGAGGACCA TGGCCATCAT
GATGCCGACC ACAAGCCGGC ATTCTTCCAG CGCTGGTTCA TGTCGACGAA CCACAAGGAC
ATCGGCACCC TCTACCTGAT CTTCGCGATC GTCGCCGGCA TCATCGGCGG CGCGATCTCG
GGCCTGATGC GCGCCGAGCT CGCGGAGCCG GGCATCCAGT ATCTGCAGGT CTGGACGAAG
CTGATGGGCG GCGCGCCCGA TTTCGACTCC GCGCTGCACA TGTGGAACGT GCTCATCACC
GCGCACGGCC TGATCATGGT GTTCTTCATG GTCATGCCCG CGATCATCGG CGGTTTCGGC
AACTGGTTCG TCCCGATCAT GATCGGCGCG CCCGACATGG CCTTCCCGCG GATGAACAAC
ATCAGCTTCT GGCTGCTCAT CCCGGCCTTC TCGCTGCTGC TCGGCTCGTC CTTCTTCTCG
GGCGGCACCG GCCACGGCGC CGGCACCGGC TGGACCGTCT ACGCCCCGCT GTCGACCAGC
GGCTCGGCGG GCGCGTCGGT CGACATGGCG ATCCTGTCGC TCCACCTCGC GGGCGCCTCG
TCGATCCTCG GCGCGGTCAA CTTCATCACG ACCATCTTCA ACATGCGCGC GCCGGGCATG
ACCCTGCACA AGATGCCGCT GTTCGTCTGG TCGGTCCTCG TCACCGCCTT CCTGCTGCTG
CTCGCGCTGC CGGTCCTCGC CGCCGCGATC ACCATGCTGC TCACCGACCG CAATTTCGGC
ACGACCTTCT ATGACGCGTC GGGCGGCGGC GATCCGGTGC TCTACCAGCA CCTCTTCTGG
TTCTTCGGCC ACCCCGAAGT GTACATCATG ATCCTGCCGG GCTTCGGCAT CATCAGCCAG
ATCGTCTCGA CCTTCTCGAA GAAGCCGGTG TTCGGCTATC TCGGCATGGC CTACGCCATG
GTCGCGATCG GCGTCGTCGG CTTCGTCGTG TGGGCGCACC ACATGTTCAC CACCGGCATG
TCGGTCGACA CCAAGATGTA CTTCACCGCC GCGACGATGG TGATCGCGGT TCCGACCGGC
ATCAAGATCT TCTCGTGGAT CGCGACGATG TGGGGCGGCT CGATCACCTT CAAGACGCCG
ATGCTCTGGG CGATCGGCTT CATCTTCCTG TTCACCGTCG GCGGCGTCAC CGGCGTCGTG
CTCGCCAACG GCGGCGTCGA CAACTACATG CACGACACCT ACTACGTCGT CGCGCACTTC
CACTATGTGC TCTCGCTGGG CGCGGTGTTC TCGCTGTTCG CCGCCTTCTA CTACTGGTTC
GGCAAGATGA CCGGCCGGAT GTACAACGAG TTCCTGGGCC AGGTGCACTT CTGGCTGTTC
TTCATCGGCG TGAACGTCCT GTTCTTCCCG ATGCACTTCC TGGGCCTCGA CGGCATGCCC
CGCCGTATCC CGGACTATCC GGACGCCTTC CAGCACTGGA ACTCGGTTGC CACGCACGGC
TACGAGCTCA TGGCCTTCTC GATGATCTTC TTCTTCATCA ACGTCTTCTG GTCGATGTTC
GCGGGCAAGA AGGCGGAGGG CAACTACTGG GGCGAAGGCG CGACGACGCT CGAATGGACC
CTGTCGAGCC CGCCGCCGTA CCACCAGTTC GAGCAGCTCC CGCATATCGG TGACGACCAC
AGTCACTGA
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| Protein sequence | MSDITATASH FQAHEDHGHH DADHKPAFFQ RWFMSTNHKD IGTLYLIFAI VAGIIGGAIS
GLMRAELAEP GIQYLQVWTK LMGGAPDFDS ALHMWNVLIT AHGLIMVFFM VMPAIIGGFG
NWFVPIMIGA PDMAFPRMNN ISFWLLIPAF SLLLGSSFFS GGTGHGAGTG WTVYAPLSTS
GSAGASVDMA ILSLHLAGAS SILGAVNFIT TIFNMRAPGM TLHKMPLFVW SVLVTAFLLL
LALPVLAAAI TMLLTDRNFG TTFYDASGGG DPVLYQHLFW FFGHPEVYIM ILPGFGIISQ
IVSTFSKKPV FGYLGMAYAM VAIGVVGFVV WAHHMFTTGM SVDTKMYFTA ATMVIAVPTG
IKIFSWIATM WGGSITFKTP MLWAIGFIFL FTVGGVTGVV LANGGVDNYM HDTYYVVAHF
HYVLSLGAVF SLFAAFYYWF GKMTGRMYNE FLGQVHFWLF FIGVNVLFFP MHFLGLDGMP
RRIPDYPDAF QHWNSVATHG YELMAFSMIF FFINVFWSMF AGKKAEGNYW GEGATTLEWT
LSSPPPYHQF EQLPHIGDDH SH
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