| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3858 |
|---|
| Symbol | |
|---|
| ID | 5197978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 4244226 |
|---|
| End bp | 4245140 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640583413 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001264341 |
|---|
| Protein GI | 148556759 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCGCC ATCGCCTGAT ATCGACCCTG CTGCTTGCCG CGACGATGCC CGCCTTCCCC
GCGATGGCAT CGGTCGAGGC CCCCGCCGCC GCGTCCCGAT CCCCCGCGGC GGCGGACCGT
TTCGTCACGG TCGAGGGCAT CCGCTTCCGG GTGCGCGAGG AAGGCCCGCG CAGCGCGCCG
CCGATCGTCC TGATCCACGG CTTCACCTTC AGCCTGGAAA GCTGGGACGG CTGGGCCGCC
GACCTCGCCC GCGACCATCG CGTGATCCGC TTCGACCTTG CCGGCCATGG ACTGAGCACC
CCCGACCCAC GCGGCCGGTA CGGCACGGCG GCGCGGGTGC GGCAGCTCGG CAAGCTGCTC
GACCGGCTCG GCGTCGCCCA TGCGACGATC GTCGGCAACA GCTTCGGCGG GCTCGTCGCC
TGGAACTTCG CTGTCGCCCA TCCGCGCCGG GTCGATCGCC TGATCCTGGT CGACAGCGCC
GCCTATTCGA TCAACGGCGT CACCGAGAAG CCGGTGCCCG TGCCTGACAT GATGCGCGGC
TATCTGCTCG ATCCCAAGCC GGCGGCGGTC GCCTTCTCGG CCGGGACGAT CTTCGCCCAT
CCCGAGCGGC TGACCCCCGA CCGGCTGGCG CTGATGCGGA CCATGATCGC CCGCAACGGC
CCGGCGCTGG TCGCGCACCT CGAACAGTTC ACCCTGCCTG ACCCGCAGGG CCCGCTCGGC
CGGATCACGG CGCCGACGCT GATCCTCTGG GGCCGCGCCG ACAAGGTGAT CCCGGTCGCC
CAGGCCGATC AGCTCGCCGC CGCGATCAAG GGATCGAAGC TCATCATCTA CGACGATGTC
GGCCACGCCC CGCAGGAGGA GGCCAGCGCC GCCAGCATCG CCGACGTCCG CGCTTTTCTG
AACGACAGCA AATGA
|
|---|
| Protein sequence | MVRHRLISTL LLAATMPAFP AMASVEAPAA ASRSPAAADR FVTVEGIRFR VREEGPRSAP
PIVLIHGFTF SLESWDGWAA DLARDHRVIR FDLAGHGLST PDPRGRYGTA ARVRQLGKLL
DRLGVAHATI VGNSFGGLVA WNFAVAHPRR VDRLILVDSA AYSINGVTEK PVPVPDMMRG
YLLDPKPAAV AFSAGTIFAH PERLTPDRLA LMRTMIARNG PALVAHLEQF TLPDPQGPLG
RITAPTLILW GRADKVIPVA QADQLAAAIK GSKLIIYDDV GHAPQEEASA ASIADVRAFL
NDSK
|
|---|
| |