| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3856 |
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| Symbol | |
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| ID | 5197976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4240706 |
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| End bp | 4241923 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583411 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001264339 |
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| Protein GI | 148556757 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.437041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGCGA TGCTGCTGCT CGCCTATACG CTCAACTTCA TCGACCGGCA GATCATCGGC
ATCCTCGCGG TGCCGATCAA GGCCGACCTG TCGCTCAGCG ACGCGCAGCT CGGCCTGATG
GGCGGGCTCG CCTTCGCGCT GTTCTACACC GGGCTCGGCA TCCCGATCGC GATGCTCGCC
GACCGGCGCG ACCGCTCGCG GATCATGACC GCCGCGCTCG CGATCTGGAG CCTGATGACC
GCGCTGTGCG GCTTCGCCCA GAATTTCTGG CAGCTCTTCG CCGCGCGATT GGGCGTCGGC
ATCGGCGAGG CGGGCGGCGT CGCCCCCGCC TATACGCTGA TCGCCGACCT CTTCCCGCCC
GAGCGGCGCG CCCGCGCGCT GGCGCTCTAT TCGTTCGGCA TCCCGATCGG CAGCGCCACC
GGCATCGTCT TCGGCGGGGT GATCGCGACG CTGATCGACT GGCGATCGGC CTTCTTCATC
GTCGGCGCGG CCGGGCTGCT GCTCGCCCCG CTGTTCCGCC GCGTCGTCCG CGACCCGCGC
GGCGACCGCC CGGCCGCGGG CGCGACGGCG GTCGGCCTCC GCACCGTCAT CGCCACGCTG
CTGACCAAGC CGAGCTTCTG GCTGCTCAGC GTCGGCGCGG CCTGTTCGTC GATGATGGGC
TATGGCCTGT TCTTCTGGCT GCCGAGCTTC TTCGTGCGCA GCTTCGGGAT CAGCCTGCTC
GAAGCCTCAT TGGGCTATGG CGCGATCCTG CTGGTCGCGG GGCTCGCCGG CATCTGGATG
GGCGGCGCGC TGTCGGACCG GCTCGCCAGC CGGTCGAAGG CCTATTATGC GCTCGTGCCC
GCGCTCGCCT TCGTCGGCAC CCTCCCCTTC TACGCGCTCG GCATCTCGGC CCAATCACTG
TTGCTCAGCC TCGCGCTGCT GCTGGTGCCG ACCGCGCTAG GCCTCGTCTG GCTCGGCCCG
GTCATCGCGG CGGTGCAGGC GGTGGTCCCG GCGTCGATGC GCTCGACCGC CTCGGCGATC
TTCCTGTTCG TCAACAACCT GATCGGGATC GGCATCGGCA CCCCGGCGAT CGGCTGGATC
TCCGATCACC TCAAGGCGCA GTACGGCGAG GAGGCGCTGC GCTACGCGAT CCTGTCGGGC
ACCGGCTTCT ACGTCCTCGC CACCCTGTTC CTGCTGCTCG CCGCCTGGCG CCTGCCGCGC
GACTGGCACC AGGGCTGA
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| Protein sequence | MMAMLLLAYT LNFIDRQIIG ILAVPIKADL SLSDAQLGLM GGLAFALFYT GLGIPIAMLA
DRRDRSRIMT AALAIWSLMT ALCGFAQNFW QLFAARLGVG IGEAGGVAPA YTLIADLFPP
ERRARALALY SFGIPIGSAT GIVFGGVIAT LIDWRSAFFI VGAAGLLLAP LFRRVVRDPR
GDRPAAGATA VGLRTVIATL LTKPSFWLLS VGAACSSMMG YGLFFWLPSF FVRSFGISLL
EASLGYGAIL LVAGLAGIWM GGALSDRLAS RSKAYYALVP ALAFVGTLPF YALGISAQSL
LLSLALLLVP TALGLVWLGP VIAAVQAVVP ASMRSTASAI FLFVNNLIGI GIGTPAIGWI
SDHLKAQYGE EALRYAILSG TGFYVLATLF LLLAAWRLPR DWHQG
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