Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3828 |
Symbol | |
ID | 5198373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4203473 |
End bp | 4205050 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640583383 |
Product | integral membrane protein MviN |
Protein accession | YP_001264311 |
Protein GI | 148556729 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.831164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0288471 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGC TGCGCGCCAG CGCGACGATC GGCGGGCTGA CGCTGGTCAG CCGGGTGCTC GGCTTCCTGC GCGACATGCT GATGGCGCGC TTCGTCGGCG CGGGCTTCGC GTCGGACGCC TTCCTGATCG CCTGGCGCCT GCCCAACCTG TTCCGCGCGC TGTTCGCCGA AGGGGCCTTC TCCGCCGCCT TCGTGCCGAT GTTCAACCGC ACCGTCGCCG AGGCCGAGGC GAAGGAGCCG GGCAACGGCC TCGCCATCGC GCTGCGCTTC GCCGAGGACG TGCTGTCGGT CCTCCTCCCC TTCCTGATCG TCTTCACCGT CGCCATGATG CTGGCGGCGG GGCCGATCGT CTGGGCGATG ACCGGGGGAT TCCCCGATGG CGGCCCCGAG AAATTCGCGC TGGCGACGCA ATATACGCGG ATCACCTTTC CCTATCTGAT GCTGATCTCG CTGGTGTCGC TGCTCGGCGG CATCCTCAAT TCGCTCAACC GCTTCTGGGT CAACGCCGCC GCGCCGATCC TGCTCAACAT CTGCCTGATC GTCGGCCTGC TGTTCTTCCG CGGCCATAGC GAGGTGGAGA CCGCGCGGAC CCAGGCGATC GCGGTCACCG TGTCGGGCGC GCTGCAGCTC GCCTGGCTGG TGCTCGCCTG CTGGCAGGCC GGCGTCCGGC TGCGCGTCCG CCTGCCGCGC CTCAGCCCCG AGGTGCGCAA GCTGCTCGCG CTGATCGGCC CGGCCGCGAT CGGCGCCGGA GCGGTCCAGT TCAACCTGCT GATCTCGACC ACGCTCGCCG CCCGCTTCCT GCCGCAGGGG TCGGTCTCCT ACCTCTATTA TGCCGACCGG CTGAACCAGC TTCCGCTCGG CCTGATCGGC ATCGGCGTCG GCACCGCGAT GCTGCCCAGC CTGTCGCGCC AGCTGGGCGG CGGCGACGCG AAGGCCGCGC TCGACACGCA GAACCGCGCG ATCGAGCTGG TGCTGCTGCT CACCCTGCCC GCCACCGCCG CGCTGATGGT GTCGGCGACC CCGCTGATCC GCGCGCTGCT CCAGCACGGC GTGTTCACGC CGCACGACAC GATCGCCAGC GCCCGCGCGC TGGCCGCCTT CTCGCTCGGC CTGCCCGCCT ATGTGCTGAT CAAGGTGCTC ACCCCCGGCT TCTACGCGCG CGCCGACACG AGGACGCCGG TGCGGATCGC GCTGGTGGCG ATGCTGGTCA ACCTCGTCCT CAACCTCGTC CTGATCTGGC CGCTCGCACA TGTCGGCCTG GCGCTGTCGA CGGCGATCTC GGCCTGGGTC AACGCGGTGC TGCTCTACGT CACGCTCCGC CGCCGCGACC ATTTCGCGGT CGACGACCGG CTGCGCCGCA CCGGCATCCG CCTGATCGCG GCGACGCTGG CGATGGCGGC GCTGCTGTTC CTGCTCAATC CGTGGATCGA TCCGTGGACC GGCCGCAGCC TGATCGAGCG CGTCGCCGCG CTGGGCGCGA TGATCGCGGC GGCGGTGACC GTCTATTTCG GCCTGGTCTT CGCCCTCGGC GCCTATTCGC TGGCGACGCT CAAGGGCCAG CTCCGCCGCC GACGCTGA
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Protein sequence | MSLLRASATI GGLTLVSRVL GFLRDMLMAR FVGAGFASDA FLIAWRLPNL FRALFAEGAF SAAFVPMFNR TVAEAEAKEP GNGLAIALRF AEDVLSVLLP FLIVFTVAMM LAAGPIVWAM TGGFPDGGPE KFALATQYTR ITFPYLMLIS LVSLLGGILN SLNRFWVNAA APILLNICLI VGLLFFRGHS EVETARTQAI AVTVSGALQL AWLVLACWQA GVRLRVRLPR LSPEVRKLLA LIGPAAIGAG AVQFNLLIST TLAARFLPQG SVSYLYYADR LNQLPLGLIG IGVGTAMLPS LSRQLGGGDA KAALDTQNRA IELVLLLTLP ATAALMVSAT PLIRALLQHG VFTPHDTIAS ARALAAFSLG LPAYVLIKVL TPGFYARADT RTPVRIALVA MLVNLVLNLV LIWPLAHVGL ALSTAISAWV NAVLLYVTLR RRDHFAVDDR LRRTGIRLIA ATLAMAALLF LLNPWIDPWT GRSLIERVAA LGAMIAAAVT VYFGLVFALG AYSLATLKGQ LRRRR
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