Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3824 |
Symbol | |
ID | 5199230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4196991 |
End bp | 4197785 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640583379 |
Product | glutamate racemase |
Protein accession | YP_001264307 |
Protein GI | 148556725 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0482316 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0601496 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACG ACCGCCCGAT CCTGATGTTC GATTCCGGCG TGGGCGGGCT TTCCGTGCTC GCCCCGACCC GCGCGCTGCT GCCGCAGGCC TCCTATGTCT ATGTCGCCGA CAATGGCGGC TTCCCCTACG GCATCCGCAG CGAGGCGGAG ATCGCCGCGC GCGTCCCCGC GCTGCTCGGC CGGCTGGTCG AGCGCTACCG TCCCCGGCTG GTGGTGATCG CCTGCAACAC CGCCTCGACG ATCGCGCTGG CGGCGGTGCG CGCCGCGCTC GACCTGCCGA TCGTCGGCAC GGTGCCCGCG ATCAAGCCCG CCGCCGAACG ATCGGCGGCG CGCGCGATCG GTGTGCTCGG CACCGACGCC ACCGTCCGCC AGCCCTATGT CGACGACCTG TCGGCCCGCT TCGCCGCCGA TTGCCTGGTG CTGCGCCACG GCTCGGCGCG GCTGGTCGAG CTGGCCGAGG CGAAGCTGCG CGGCGAGCCG ACCGACCCGG CCGACTATCG CGCCGTGCTC GACGGCCTGC TCGGCCAGCC GGGCGGCGAC CGGATCGACA TGGTGGTGCT CGCCTGCACC CATTTCCCGC TGGTCGAGGC CGAGCTCGCC GCCGCCGCGC CGCGCCCGCT GCGCTTCGTC GACGGTGGTC CCGGCATCGC CCGGCGCGTC GCCCATCTGA CCGAGGGACA GGACTGGCCG GCCGCGCCGA AGGGCGAAGC GGTGTTCACC GCCCCGCTCG ACGTCGGCGA CGCGCTGCGG GCCGGGCTTG CCGCGCGCGG GCTCGCCACC ATCTCGATCC TGTGA
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Protein sequence | MADDRPILMF DSGVGGLSVL APTRALLPQA SYVYVADNGG FPYGIRSEAE IAARVPALLG RLVERYRPRL VVIACNTAST IALAAVRAAL DLPIVGTVPA IKPAAERSAA RAIGVLGTDA TVRQPYVDDL SARFAADCLV LRHGSARLVE LAEAKLRGEP TDPADYRAVL DGLLGQPGGD RIDMVVLACT HFPLVEAELA AAAPRPLRFV DGGPGIARRV AHLTEGQDWP AAPKGEAVFT APLDVGDALR AGLAARGLAT ISIL
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