| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3810 |
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| Symbol | |
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| ID | 5197590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4182148 |
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| End bp | 4184472 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640583365 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001264293 |
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| Protein GI | 148556711 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0319705 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGATA CGAAGAAAGT TGAAATCCAG TGGGGCGGGC AGACCCTCAC CCTGGAAACG
GGCCGCGTTG CCCGTCAGGC CGACGGCGCG GTGCTCGCGA CCCTCGGCGA GACCGTCGTC
CTCTGCGCCG TCACCGCGGC GCGCAGCGTC AAGGAAGGGC AGGACTTCTT CCCGCTGACC
GTCCATTATC AGGAGAAGTA TTTCTCGTCG GGTCGCATTC CCGGCGGCTT CTTCAAGCGC
GAGCGCGGCG CGACCGAGAA GGAGACGCTG GTCTCCCGCC TCATCGATCG CCCGATCCGT
CCGCTCTTCC CGGAAGGCTT CTACAACGAG ATCAACGTCA TCGCCCAGGT GCTGAGCTAT
GACGGCGAGA ACGAGCCCGA CATCCTGGCG ATGATCGCCG CCTCGGCCGC GCTCACCATC
TCGGGCGTTC CCTTCATGGG CCCGATCGGC GCCGCCCGCG TCGGCTACAA GGACGGCGAG
TATCTGCTCA ACCCGACCGA CGCCGACGTC GCCGCCGGCG ATCTCGACCT GGTCGTCGCC
GCCACCCACG ACGCGGTGAT GATGGTCGAA TCCGAAGCCA AGGAGCTGTC GGAAGAGGTC
ATGCTCGGCG CCGTCATGTT CGCCCACAAG GCGAGCCAGG ACGTCATCAA GGCGATCATC
AAGCTCGCCG AGAAGTCGGC CAAGGATCCG TGGGAGATGG CGCCGCAGGC CGATCTGTCC
GCCGCCAAGA CCAAGCTCAA GAAGCTGGTC GGCAAGGACA TCACCGCCGC CTACAAGCTG
ACCAACAAGT CGGCCCGCTC GAGCGCCCTG AACGAGGCGC GCGCCAAGGC CAAGGAAGCC
TTCGCCGACG CGACCCCGCA GGACCAGATG GCCGCGATCA AGCTCGTCAA GAAGCTCGAG
GCCGAGATCG TCCGCACGGC GATCCTCAAG GACGGCCGCC GCATCGATGG CCGCGACACC
AGGACGGTCC GTCCGATCGT CGCGGAAGCG CACTTCCTGC CGCGGGCCCA TGGTTCGGCG
CTGTTCACCC GCGGCGAGAC GCAGAGCATC TCGACCTGCA CCTTGGGCAC CAAGGAAAGC
GAGCAGATGA TCGACGGCCT GAACGGGCTG CGCTACGAGC ATTTCATGCT CCACTACAAC
TTCCCGCCCT ATTCGGTCGG TGAAGTGGGC CGCTTCGGCG CGCCGGGCCG TCGCGAAGTC
GGCCATGGCA AGCTGGCGTG GCGCGCGCTG CACGCGGTGC TGCCGACCAA GGAGGAGTTC
CCCTACACCA TCCGCCTGAC CTCGGACATC ACCGAGTCGA ACGGTTCGTC GTCGATGGCG
ACGGTGTGCG GCGGCAGCCT CGCGATGATG GACGCCGGCG TGCCGATCAA GCGTCCGGTC
TCGGGCATCG CGATGGGCCT GATCCTCGAA GGCAAGGACT TCGCGGTGAT CAGCGACATC
CTCGGCGACG AGGATCATCT CGGCGACATG GACTTCAAGG TTGCGGGCAC GTCCGAAGGC
ATCACCACGA TGCAGATGGA CATCAAGATC GCCGGCATCA CCGAGGAGAT CTTCAAGACC
GCGCTGCTCC AGGCGAAGGA AGGCCGCGCC CATATCCTGG GCGAGATGGC CAAGGCGCTC
GACCACACCC GCACCGAGCT GTCGGCGCAC GCGCCGCGGA TCGAGACGAT GTCGGTTCCC
AAGGACAAGA TCCGCGACAT CATCGGCACC GGCGGCAAGA TCATCCGCGA GATCGTCGCC
ACCACCGGCG CGAAGGTCGA CATCGACGAT GACGGCACCG TCAAGATCTC GTCGTCCGAC
ACCGCGCAGA TCGAGGCCGC CAGGAACTGG ATCATCGGCA TCGTCGCCGA GCCGGAAGTG
GGCAAGATCT ACACCGGCAA GGTCGTCAAC CTCGTCGATT TCGGCGCGTT CGTGAACTTC
ATGGGCGGCA AGGACGGCCT CGTCCACGTC TCCGAGATCA AGAACGAGCG CGTCGAGAAG
GTCGCGGATG CCCTGTCCGA AGGCCAGGAA GTCAAGGTCA AGGTCCTCGA GATCGACAAT
CGCGGCAAGG TCCGCCTGTC GATGCGCGTC GTCGACCAGG AGACCGGCGA GGAACTGCCC
GACACCCGCC CGCCCCGCGA GGAGCGTCCG CGCGGTGACC GTGGCGACCG CGGCGACCGT
GGCCCCCGCC GCGACGGCGA CCGCCGTCGC GAGGGCGGCG ATCGCGGCCC GCGCCGCGAC
CGTGGCGACC GGGGCGACCG TCCCCGCCGC GAGCGTTCGG AAGGCGGCGA CGAGGGCCCC
GCGCCCGACT TCGCGCCGGC CTTCCTGACC CGCGACGACG ACTGA
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| Protein sequence | MFDTKKVEIQ WGGQTLTLET GRVARQADGA VLATLGETVV LCAVTAARSV KEGQDFFPLT
VHYQEKYFSS GRIPGGFFKR ERGATEKETL VSRLIDRPIR PLFPEGFYNE INVIAQVLSY
DGENEPDILA MIAASAALTI SGVPFMGPIG AARVGYKDGE YLLNPTDADV AAGDLDLVVA
ATHDAVMMVE SEAKELSEEV MLGAVMFAHK ASQDVIKAII KLAEKSAKDP WEMAPQADLS
AAKTKLKKLV GKDITAAYKL TNKSARSSAL NEARAKAKEA FADATPQDQM AAIKLVKKLE
AEIVRTAILK DGRRIDGRDT RTVRPIVAEA HFLPRAHGSA LFTRGETQSI STCTLGTKES
EQMIDGLNGL RYEHFMLHYN FPPYSVGEVG RFGAPGRREV GHGKLAWRAL HAVLPTKEEF
PYTIRLTSDI TESNGSSSMA TVCGGSLAMM DAGVPIKRPV SGIAMGLILE GKDFAVISDI
LGDEDHLGDM DFKVAGTSEG ITTMQMDIKI AGITEEIFKT ALLQAKEGRA HILGEMAKAL
DHTRTELSAH APRIETMSVP KDKIRDIIGT GGKIIREIVA TTGAKVDIDD DGTVKISSSD
TAQIEAARNW IIGIVAEPEV GKIYTGKVVN LVDFGAFVNF MGGKDGLVHV SEIKNERVEK
VADALSEGQE VKVKVLEIDN RGKVRLSMRV VDQETGEELP DTRPPREERP RGDRGDRGDR
GPRRDGDRRR EGGDRGPRRD RGDRGDRPRR ERSEGGDEGP APDFAPAFLT RDDD
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