Gene Swit_3809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3809 
Symbol 
ID5197589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4181690 
End bp4181959 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content62% 
IMG OID640583364 
ProductSSU ribosomal protein S15P 
Protein accessionYP_001264292 
Protein GI148556710 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0184] Ribosomal protein S15P/S13E 
TIGRFAM ID[TIGR00952] ribosomal protein S15, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.017638 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTA CCGCCGAACG CAAGACCGCG ATCATTGCCG ACAACGCCCG TGCCAACGGC 
GACACCGGCA GCCCCGAAGT CCAGGTCGCG ATCCTGACCG AGCGCATCAA CAACCTGACC
GAGCATTTCA AGAGCCATGC GAAGGACAAC CATTCGCGCC GCGGCCTTCT GATGCTGGTC
AACAAGCGCC GCCGCCTTCT CGACTATCTC AAGCGGAAGG ACGCGGAGCG CTACACCGCA
CTGATCGGCA AGCTCGGCCT GCGCAAGTAA
 
Protein sequence
MTVTAERKTA IIADNARANG DTGSPEVQVA ILTERINNLT EHFKSHAKDN HSRRGLLMLV 
NKRRRLLDYL KRKDAERYTA LIGKLGLRK