| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3797 |
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| Symbol | |
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| ID | 5199144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4167594 |
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| End bp | 4169384 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640583352 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001264280 |
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| Protein GI | 148556698 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.163707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTCT ATGAGGCCCC GCTGCGCGAC ATGCGCTTCG TCATCCACGA GCTGTTCGGC
GACGACGGTT TCGGCAACCT GCCCGCGCAT GAAGAGTTCA CCCCCGACCT GATCGACGCG
GTGATCGAGG AGGCGGCGAA GCTGGCGCAG GACGTGCTGC TGCCGATCAA CGCCAGCGGC
GATCTGGAGG GCTGCGTCTG GGAGAATGGC GTCGTCCGCA CCCCGGCCGG CTTCAAGGAG
GCCTATGCCC AGTTCCGCGA CGGCGGCTGG TGCGCGCTCG CCAGCGATCC GAAATGGGGC
GGGCAGGGCC TGCCCGAGAC GGTCAACAAG CTGGTCGAGG AGATGATCAG CTCGGCCAAC
CTCTCCTTCG GCCTTTATCC CGGCCTCACC CATGGCGGCA CCACCGCGCT CAAGGCGCAT
GCGTCGGCCG ACCTTCAGGA GCGCTTCCTG CCCAAGATGG TCTCGGGCGT CTGGTCGGGG
ACGATGTGCC TGACCGAGCC GCATTGCGGC ACCGACCTGG GCATGCTGCG CACCAAGGCG
GTGCCGCAGC CGGACGGCAG CCACCGGATC ACCGGCAACA AGATCTTCAT CTCGGCCGGC
GACCATGATC TGAGCGAGAA CATCATCCAT CTCGTCCTCG CCCGCCTGCC CGACGCGCCG
CCGGGCGTGA AGGGGATCAG CCTGTTCGTC GTCCCCAAAT ATCTGCCGAA GGAGGACGGT
TCGGTCGGCC CGTCGAACGG CGTGTCGTGC ACCGGCATCG AGCACAAGAT GGGCCTCAAG
GCCTCGGCCA CCTGCCAGAT GAGCTTCGAC GATTCGACCG GCTGGCTGGT CGGCGAGCCG
AACAGCGGCC TCAATGCGAT GTTCACGATG ATGAACACCG AGCGCGTCTC GGTCGGCGTC
CAGGGCCTGG GCGTCGCGAC CGCCGCCTAT CAGAGCGCGG TCGCCTATGC GAAGGACCGC
ATCCAGGGGC GGGCGCTGTC GGGCCCGAAA CGCCCCGACC TCGCCGCCGA CCCGATCATC
GTCCACCCCG ACGTTCGCCG CATGCTGATG ACGATGCGCG CCTATACCGA GGGCTGCCGC
ATGCTCAGCA TCTGGGTCGC GCGCGCGCTC GATGCCGAGC GCCATTCGCC CGATGCCGAG
GTGCGCCAGC GCGCCGAGGA CATGACCGCG CTGATGACCC CGGTGGTCAA GGCGCTGCTC
ACCGACCTCG GCCATGAGAC CGCGCAGATC GGTATCCAGG TCTATGGCGG CCACGGCTAC
ATCCGCGAGC ACGGCATGGA GCAATATGCC CGCGATGCCC GCATCACGAT GATCTACGAG
GGCACCAACG GCGTCCAGGC GCTCGACCTC GTCGGCCGCA AGATGCCGGC GCATGGCGGC
CGCTACCTGC GCTCCTTCTT CCACCCGGTC GCCGCCTTCA TCGAGCAGCA CAAGGCGGTG
CCGGGCATGG AGAAGATGAT CGAGGCGCTG GAGAAGGCGT TCGGCGCGCT CCAGCTCTCG
ACCGCGACGA TCGCGCAGAA GGGCCTCGCC GACCCGGAGG AGGCGGGCGC CGCCTCGTCC
GACTATCTCC GCCTGCTCGG CCTTGTCGCC ATGGCCTATC TGTTCGCCAG GGCGGCCAAG
ATCGCCGGCA TGAAGAAGAT GATGGGCCAG GACCCGGACG GCTTCTACGC CGCCAAGCTG
GTGACGGTCC GCTTCTTCTA CGAACGCATC CTGCCGCAGG TCGCCGGGCT GTTCCAGGCG
ATCAAGGCCG GCAAGCGATC GATGATGGAG CTGCCCGAAG AAGCGTTCTG A
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| Protein sequence | MQVYEAPLRD MRFVIHELFG DDGFGNLPAH EEFTPDLIDA VIEEAAKLAQ DVLLPINASG
DLEGCVWENG VVRTPAGFKE AYAQFRDGGW CALASDPKWG GQGLPETVNK LVEEMISSAN
LSFGLYPGLT HGGTTALKAH ASADLQERFL PKMVSGVWSG TMCLTEPHCG TDLGMLRTKA
VPQPDGSHRI TGNKIFISAG DHDLSENIIH LVLARLPDAP PGVKGISLFV VPKYLPKEDG
SVGPSNGVSC TGIEHKMGLK ASATCQMSFD DSTGWLVGEP NSGLNAMFTM MNTERVSVGV
QGLGVATAAY QSAVAYAKDR IQGRALSGPK RPDLAADPII VHPDVRRMLM TMRAYTEGCR
MLSIWVARAL DAERHSPDAE VRQRAEDMTA LMTPVVKALL TDLGHETAQI GIQVYGGHGY
IREHGMEQYA RDARITMIYE GTNGVQALDL VGRKMPAHGG RYLRSFFHPV AAFIEQHKAV
PGMEKMIEAL EKAFGALQLS TATIAQKGLA DPEEAGAASS DYLRLLGLVA MAYLFARAAK
IAGMKKMMGQ DPDGFYAAKL VTVRFFYERI LPQVAGLFQA IKAGKRSMME LPEEAF
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