| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3772 |
|---|
| Symbol | |
|---|
| ID | 5198298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 4140446 |
|---|
| End bp | 4141492 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640583327 |
|---|
| Product | 2OG-Fe(II) oxygenase |
|---|
| Protein accession | YP_001264255 |
|---|
| Protein GI | 148556673 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3491] Isopenicillin N synthase and related dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGC GCGCCGCCGA CAGATCCTTG CTTATCCGCG ATTTCCGAGG CGGCGGATGT
TTCCATCCGC CTAGAAATCG CTCTATATCC GCCGCCATGA CCGACATCGC AGAGATGACC
AGCGTGCCCA GCGTCTCGCT GGCGACCAGC CATTCCGATC CGGACGGCTT CGCCCAGGCG
ATCGGCCGCT CGTTCGAGCG CTTCGGCTTC GCCGTCGTCG CCGATCACGG TATCCCGGCC
GAGCTGATCG CGCGGGCGGA GGCCACCGCC CGCGCCTTCT TCGCGCTGCC GGAGGCGGTC
AAGCGCGCCT ATTGCGTCGA GGGCGGCGCC GGCCAGCGCG GCTACACCCC CTTCCGGGTC
GAGACCGCCA AGGACGCGAC CGAGGCCGAC CTGAAGGAAT TCTGGCATGT CGGCCGCGAG
CTGCCGGCGG GGCATCGCTT CGCGGGCGAG ATGCCGGCCA ATATCTGGCC GGCCGAGGTG
GAGGATTTCC GCCAGGTCAC TCTGGAGCTG TTCGACGCCT TCGAGGCGAC CGGGCGGCGC
ATCCTCTCGG CGATCGCGCG CTATCTGGGC CTCGCCCCCG ATGTCTTCGA CGACGCGATC
GAGGACGGCA ATTCGATCCT GCGCCTGCTC CATTATCCGC CGATCGGTCC CGACGCGCCC
GGCATCCGCG CCGGCGCGCA TGAGGACATC AACGCGATCA CCCTGCTGCT CGGGGCCGAG
GAGGGCGGCC TCCAGCTCCT CGACCGCGAC GGCCGCTGGC TCGCGGTCGG CATCGCGCCG
GGCGAGCTGG TGGTCAACAT CGGCGACATG CTCCAGCGGC TGACTAACCG CAAGCTGCCC
TCGACCAGCC ACCGGGTGAT GAACCCGCCG CCCGAACGGC GCGGCTTCGC GCGCTATTCG
ATGCCCTTCT TCCTGCACTT CCGCCCCGAT TACCTGATCG AGACGCTGCC GCAGACGATC
GACGCCGCGC ATCCCAACCA GTTCCCCGAA CCGATCACCG CGAACGACTA CCTCCTGCAG
CGGCTGCGCG AGATAAAGCT GATCTGA
|
|---|
| Protein sequence | MTARAADRSL LIRDFRGGGC FHPPRNRSIS AAMTDIAEMT SVPSVSLATS HSDPDGFAQA
IGRSFERFGF AVVADHGIPA ELIARAEATA RAFFALPEAV KRAYCVEGGA GQRGYTPFRV
ETAKDATEAD LKEFWHVGRE LPAGHRFAGE MPANIWPAEV EDFRQVTLEL FDAFEATGRR
ILSAIARYLG LAPDVFDDAI EDGNSILRLL HYPPIGPDAP GIRAGAHEDI NAITLLLGAE
EGGLQLLDRD GRWLAVGIAP GELVVNIGDM LQRLTNRKLP STSHRVMNPP PERRGFARYS
MPFFLHFRPD YLIETLPQTI DAAHPNQFPE PITANDYLLQ RLREIKLI
|
|---|
| |