Gene Swit_3716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3716 
Symbol 
ID5198327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4080930 
End bp4081619 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content63% 
IMG OID640583272 
Productcytochrome B561 
Protein accessionYP_001264200 
Protein GI148556618 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.254842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACATT CTGATCGCGC AGAGACATTC AAGGTTTGGG ATGCCCCGCT GCGGCTGTTC 
CACTGGCTGC TGGTTGCGGC AATCACGATC GCCTTCCTGT CGTCCGAAAG CGATAGCCCG
ATCGCGGCCT GGCACATGGT GGCAGGATGG AGCGCGGCGG TGTTGATCGC TTTCCGACTG
ATCTGGGGCT TGGTCGGCGG CGAGCACGCC CGCTTTGTGG ATTTCATCAG ACCCTCAGCG
ATCGCCGGGC ACATCCGCGA ACTACTGGCG GGCCGACCCG AGCGCGCCAT CGGGCACAAT
CCCTTGGGCG CGATCGCAGT GATCGCTCTT ATCGGCCTCA CAGGGGTCGT TCTATGGAGC
GGGATTGCCG TCGCGGCAGG TGGTATGGAC GAGGATCTCC ACGAAGCCCT TGCCTATGGC
CTGCTCGCCC TCATCGGCAT CCATGTCGGT GCTGTGTTGC TGATGTCGGC GGTTACCCGC
GAGAATCTGG TTCGCGCCAT GATCGGCGGC CGCAAGAAAC GCGCCCTCCA TCCCGGAGCG
CAGGACGCGC GGGCACCGGG CATCTTTGCG ATGCTGCTGG GAGTCGTGGC GATCGTCCTG
ACAAGTATCG CGATTCTCAA GATGGAGCCG ATGGCCTTCT CGCCTCAGCA CCGCGAGGCG
CATCATGGCG TCCCTGGCGA ACGCGACTAA
 
Protein sequence
MAHSDRAETF KVWDAPLRLF HWLLVAAITI AFLSSESDSP IAAWHMVAGW SAAVLIAFRL 
IWGLVGGEHA RFVDFIRPSA IAGHIRELLA GRPERAIGHN PLGAIAVIAL IGLTGVVLWS
GIAVAAGGMD EDLHEALAYG LLALIGIHVG AVLLMSAVTR ENLVRAMIGG RKKRALHPGA
QDARAPGIFA MLLGVVAIVL TSIAILKMEP MAFSPQHREA HHGVPGERD