| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3687 |
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| Symbol | |
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| ID | 5198781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4049320 |
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| End bp | 4050222 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640583243 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001264171 |
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| Protein GI | 148556589 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTTCCC CGATCATCCC TCTGTTCGCG GAAAGACCGC CTCATCCCTC CGTCCCGCTC
GGTCGCAGGC CGGCCGGCGC GCGCAGCGAA GGTCAAGGGC GGCCCCCGGC CGGCGCTTCG
CGCGCACCCT TTACCGGAGC GAGCACGCTG GCAGGCTGGT GGCGGAGCGG GGGCGGGTCG
GCCGCCATGC TCGCGGTCCT GCTGCTGCTC GCGCCGGGCG CTGCGCCCGT TCCCGCGCTG
GCGCAGGACG CGCCGCCCGA GCGATCGGCC GCGCGCCATC CCTATGCCGC CCATGTCGCC
GACGCGGCCC GGCGCTTCGG CATCCCCGAA CGCTGGATAT GGGCGGTCAT GCGCGTCGAG
AGCAACGGCG ATGTTCGCGC CGTCTCGACG GCCGGGGCGA TGGGCCTGAT GCAGATCATG
CCCGGCACCT GGGCGGGCCT CCACGCGCGC CATCGCCTCG GGTCCGATCC GTTCGATCCG
CGCGACAACA TCATGGCGGG CGCGGCCTAT CTGCGCGCGA TGCACGACCG CTACGGCAAC
GTGACGGCGA TGCTGGCGGC CTATAATGCG GGGCCGGGCC GCTACGACGA ATATCTGTCG
CGCGGCCGTC CGCTGCCCGC CGAGACCCGC GCCTATCTCA CAAAGCTGGC GTCGATCACC
GGCGGTTCGG ACGACACTCA GCTTGCCGTC GCGCCACCAT CCGATCCCTT CGCCTGGCGT
CGCGCCGCGC TGTTCGCGGT GCGGCCGGGC GCGCTGTCGC CTGCGCCGCC GTCCGCCGAT
CGCACGGCAT CCGAGGTGCC GCCGGAACGA CCGGCCGACG ACCGCGCCGA GCTTGTCATG
GCCGATGCCG CGCCGCCCTC CAACGGCCTG TTCGTCCCGC TTTCCGGGCG GCCTCCGCCG
TGA
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| Protein sequence | MPSPIIPLFA ERPPHPSVPL GRRPAGARSE GQGRPPAGAS RAPFTGASTL AGWWRSGGGS
AAMLAVLLLL APGAAPVPAL AQDAPPERSA ARHPYAAHVA DAARRFGIPE RWIWAVMRVE
SNGDVRAVST AGAMGLMQIM PGTWAGLHAR HRLGSDPFDP RDNIMAGAAY LRAMHDRYGN
VTAMLAAYNA GPGRYDEYLS RGRPLPAETR AYLTKLASIT GGSDDTQLAV APPSDPFAWR
RAALFAVRPG ALSPAPPSAD RTASEVPPER PADDRAELVM ADAAPPSNGL FVPLSGRPPP
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