Gene Swit_3635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3635 
Symbol 
ID5196399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3993676 
End bp3994152 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content69% 
IMG OID640583190 
Productdehydratase 
Protein accessionYP_001264119 
Protein GI148556537 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.657671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC TCGTCATCGA GACGCCGGGC GCGCTGCTCG GCCGCGAGGG GACCGCGCTC 
GGCCCGACCG ACTGGCTCAC CATCGACCAG GCGCGCGTCG ACCGCTTCGC CGATGCGACC
GGCGACCATC AGTGGATCCA TGTCGATCCG GTCCGCGCGG CCGAGGGGCC GTTCGGCGGA
ACGATCGCGC ACGGCTATCT GACGATGAGC CTGGTCAATT ATTTCCTGCC GCAGATGATC
GACGTCCGTG GCTTCTCGAT GGGCGTCAAT GTCGGCGCCG ACCGGCTCCG CTTCCTCAAT
CCCGTCCGCA CCGGCAGCCG CGTGCGCGGG ACCGGCGAGA TCGTCGGGGT CGAGGAGGTC
AAGGGCGCGA TCCAGAGCAC CGTCCGCATC ACCGTCGAGA TCGAGGGCGA GACCAAGCCC
GCCTGCGTCA TCGACACGAT CAGCCGCTAT TATCCGGAGG CCACCCCCCA TGCGTGA
 
Protein sequence
MSALVIETPG ALLGREGTAL GPTDWLTIDQ ARVDRFADAT GDHQWIHVDP VRAAEGPFGG 
TIAHGYLTMS LVNYFLPQMI DVRGFSMGVN VGADRLRFLN PVRTGSRVRG TGEIVGVEEV
KGAIQSTVRI TVEIEGETKP ACVIDTISRY YPEATPHA