| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3631 |
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| Symbol | |
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| ID | 5199401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3989730 |
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| End bp | 3990635 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640583186 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001264115 |
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| Protein GI | 148556533 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.761218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGCA TCTGCCAGGA CCGCACCGTC ATCATCACCG GCGCCGCGCG CGGCCTCGGC
AAATCCTATG CGCTGGCCTT CGCCCGCGAA GGGGCGAACG TCGTCGTCAA CGACATCGGC
ACCAGCCTGC ACGGCGAGGG GCGCGACACA TCGGCCGCCG ACGCGGTGGT CGAGGATATC
CGCGCCGCCG GCGGCAAGGC GGTCGCCAAT TATGACGACA TCACCGACTG GGACGCGGCG
GGCCGGATCG TCCGCACCGC GATCGACAGC TTCGGCGGGC TCGACGTGGT GGTGAACAAT
GCCGGCATCG TCCGCGATCG CATGTTCGTC TCGGCGACGC TGGAGGAATG GGACGCGACG
ATGCACGTCC ACCTGCGCGG CCATTTCTGC GTCAGCCGCC ACGCGGTCGA CTATTGGCGC
GCGCAGCAGA AGGCGGGCAA CCCCGTCGAC GCGCGGATCA TCAACACCAC CAGCAACGCC
GGTCTCCAGG GATCGATGGC GCAGGCGGCC TATTCGACCG CGAAGGGCGG CATCGCCGCG
CTGACCCTGG TGCAGGCGGC CGAGCTGGGC CGCTACGGCA TCACCGCCAA CGCGCTCGCC
CCCGCCGCGC GCACCCGCAT GACCGAGGGC GCCTTCGCCG AGAAGATGGC GAAGGTCGAG
AGCGGCTTCG ACGCGCAGGA CCCGGACAAT ATCGCGCCGA CCGTGGTGTG GCTGGGATCG
GTCCAGTCGC GCGACGTCAC CGGCTGCGTC TTCGAGCTGG AAGGCGGGCG CATCTCGATC
GAAGACGGCT GGGACCTCGG CCCGACGGCC GAGCAGCAGG CGCGCTGGAA CCCGGCCGAA
CTCGGCCCCG TCGTCGCCGG CCTGCTGGCG CAGCGCAAGG CCCCGCGCAA GGTGTGGGGT
AGCTGA
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| Protein sequence | MAGICQDRTV IITGAARGLG KSYALAFARE GANVVVNDIG TSLHGEGRDT SAADAVVEDI
RAAGGKAVAN YDDITDWDAA GRIVRTAIDS FGGLDVVVNN AGIVRDRMFV SATLEEWDAT
MHVHLRGHFC VSRHAVDYWR AQQKAGNPVD ARIINTTSNA GLQGSMAQAA YSTAKGGIAA
LTLVQAAELG RYGITANALA PAARTRMTEG AFAEKMAKVE SGFDAQDPDN IAPTVVWLGS
VQSRDVTGCV FELEGGRISI EDGWDLGPTA EQQARWNPAE LGPVVAGLLA QRKAPRKVWG
S
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