| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3610 |
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| Symbol | |
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| ID | 5199395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3970092 |
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| End bp | 3971483 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640583165 |
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| Product | Alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
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| Protein accession | YP_001264094 |
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| Protein GI | 148556512 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.327269 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGGC TCGTCATCGT CTCCAACCGG GTGCAGCCGC CGATCGGCGA AGGCGGCAGC
GGCGGGCAGG GCGGCCTCGC GGTCGCGCTG TCGGCGGCGC TGCGCGAATC GAGCGGCATC
TGGTTCGGCT GGTCGGGCGA GACCACCGAG CAGTTCACCG GCCATATCAA CCTGCAGCGC
AATTTCGGCG TCACCACCGC GACGATCGAC CTCGAGGAGC AGGACGTCGA CGAATATTAT
AACGGCTATG CCAACCGGAC GCTGTGGCCG CTGTTCCACT ACCGGATGGA CCTGGCCGAG
TTCGAGAGCG GCTTCGCCGA GGGCTATGAA CGGGTCAACC AGCGCTTCGC CGAGACGCTC
GAGCCGCTGA TCGAGGCCGA CGACCTCGTC TGGGTCCACG ACTATCACAT GTTCCCGCTC
GGCCAGTATC TGCGCGACCG GGGGATTGCG AACCGGATCG GCTTCTTCCT CCACATCCCC
TGGCCGCCCT ATCGGCTGCT GCTGTCGCTG CCCAACCACC GCCAGCTTGC CGAAACGCTG
TTCGCCTATG ACGTGGTCGG TTTCCAGACG CGCGATTCGC TCGACAGCTT CCGCGACTAT
GTCATCCAGG AAATGGGCGG TTCGTTCGGC GAGGACGGGC GGATCATCGT CGGCGATCGT
TCGATCATCG CGATTCATTG TCCGATCGGC ATCGATACCG ACAATTTCGT CGAGGCGACC
CGGTCGACCG CCGCGCGCCA TGCCCATCAC CGGATGCGGG AGAGCGCCAA CGGCCGCGAG
ATGATCATCG GCGTCGATCG GCTCGATTAT TCGAAGGGGT TGCAGGAACG CTTCCTCGGC
TATGAGCGGC TGCTCCAGCA GAACGAGAAG ATCCATGGCG AGGTCTTCCT GCTGCAGATC
GCGCCGCCGT CGCGCAGCGA CGTCCAGAGC TACCAGGAGA TCCGGGCCTC GCTCGATTCG
CTGTCGGGGC GGATCAACGG CGCCTATGCC GATGTCGAAT GGGTGCCGAT CCGCTACGTC
AACCGCGGCT ATCCGCGCGA CCGGCTGGCC GGCATCTATC GCGCCGCCAG GATCGGCCTC
GTCACCCCGC TGCGCGACGG GATGAACCTG GTCGCCAAGG AATATGTCGC CGCGCAGGAC
CCGGAGGACC CCGGCGTCCT GATCCTCTCC CGCTTCGCCG GCGCGGCCGA GCAGCTCACC
GAGGCGCTGC TGATCAATCC CTACAGCGCC GAGGAGATCG CCGACGCGAT CGAGCAGGCG
CTGGCGATGC CGCTGGAGGA GCGCCGGGAG CGCTGGCGCG CCTGCATGGA CAATGTCGAG
AAGGAGGACG TGATGTGGTG GCGCCGCCGC TTCACCGCCG CGCTCGAAGC GGTGACGCAG
TCGGCGGCGT GA
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| Protein sequence | MSRLVIVSNR VQPPIGEGGS GGQGGLAVAL SAALRESSGI WFGWSGETTE QFTGHINLQR
NFGVTTATID LEEQDVDEYY NGYANRTLWP LFHYRMDLAE FESGFAEGYE RVNQRFAETL
EPLIEADDLV WVHDYHMFPL GQYLRDRGIA NRIGFFLHIP WPPYRLLLSL PNHRQLAETL
FAYDVVGFQT RDSLDSFRDY VIQEMGGSFG EDGRIIVGDR SIIAIHCPIG IDTDNFVEAT
RSTAARHAHH RMRESANGRE MIIGVDRLDY SKGLQERFLG YERLLQQNEK IHGEVFLLQI
APPSRSDVQS YQEIRASLDS LSGRINGAYA DVEWVPIRYV NRGYPRDRLA GIYRAARIGL
VTPLRDGMNL VAKEYVAAQD PEDPGVLILS RFAGAAEQLT EALLINPYSA EEIADAIEQA
LAMPLEERRE RWRACMDNVE KEDVMWWRRR FTAALEAVTQ SAA
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