Gene Swit_3597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3597 
Symbol 
ID5196516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3956853 
End bp3957995 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content69% 
IMG OID640583152 
ProductDNA-directed DNA polymerase 
Protein accessionYP_001264081 
Protein GI148556499 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.456033 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTGC TTTGTTCCAT GGAGCGGCCC GATCAGCCAG CGGATGGGGA GGAAAGCGGC 
GAAGGTGGCC GCAAGATCAT CCATATCGAC ATGGATGCCT TCTACGCGTC GGTCGAACAG
CGCGACGATC CGGCGCTGAA GGGCAGGCCG GTCGCGGTCG GTGGCACCCG CGAGCGCGGC
GTCGTCGCGG CGGCAAGCTA CGAGGCGCGG AAATATGGCG TGCGATCGGC GATGGCGTCG
GCGCTGGCGC GGCGGCTGTG TCCCGACCTG CTCTTCGTCC GCCCGCGTTT CGAGGTCTAT
CGGGAGGTGT CGCGCCAGAT CCACCTCATC TTCGCCGACT ATACCGATCT GGTCGAGCCG
CTGTCGCTCG ACGAGGCCTA TCTCGACGTC ACCAACAACC ATCAGGGCAT CGCCACCGCG
ACCGAGGTCG CCCGCCAGAT CCGCGCCCGC ATCCGCGAGG AGACCGGGCT GACCGCCTCG
GCCGGGGTCT CCTACAACAA GTTCATCGCC AAGCTCGCCT CCGACCATAA CAAGCCCGAC
GGGCTCTGCG TCGTCCGGCC GGACCAGGGC CTGGCCTTCA TCGCCATGCA ACCGGTCGGG
CGCTTCCATG GCGTCGGGCC GGTGACGGCG ACGCGGATGG AGAAATTGGG CATCCACACC
GGCGCCGACC TGCGCCGGTG CAGCCGCGAA TTCCTGGGGC AGCAGTTCGG CAAGTCGGGC
GACTATTTCT ACCTCGCCGC GCGCGCGATC GATCATCGCG CGGTGCGGCC CGATCGGGTG
CGCAAGTCGA TCGGGTCGGA GAACACCTTC TTCCACGATC TCTATTCGCA CGAGGACCTG
GCGGCGGCGC TGCTCGAATC GAGCGAGTCG GTCGCCCGCC ATGCCGAGCG GACCGGCAAG
GCGGGGCGGA CGATCTCGAT CAAGCTGCGC TATTCCGACT TCCGGACCCT CACCCGCGCC
CGCACCCTGC CCGCGCCGGT CGCCGACGCG GCGCGCATCC AGGAGGTGGC GCTGGCGCTG
CTCGCGCCGC TCGAACCGGT CGCGCTCGGC GTCCGCCTGC TCGGCGTCAC CCTGTCGAGC
CTCGGCGAGG GGGACGACGA GATGGTCGTG ACGGCCGAGC AATTGGCGCT CGCCTTCGAA
TGA
 
Protein sequence
MYLLCSMERP DQPADGEESG EGGRKIIHID MDAFYASVEQ RDDPALKGRP VAVGGTRERG 
VVAAASYEAR KYGVRSAMAS ALARRLCPDL LFVRPRFEVY REVSRQIHLI FADYTDLVEP
LSLDEAYLDV TNNHQGIATA TEVARQIRAR IREETGLTAS AGVSYNKFIA KLASDHNKPD
GLCVVRPDQG LAFIAMQPVG RFHGVGPVTA TRMEKLGIHT GADLRRCSRE FLGQQFGKSG
DYFYLAARAI DHRAVRPDRV RKSIGSENTF FHDLYSHEDL AAALLESSES VARHAERTGK
AGRTISIKLR YSDFRTLTRA RTLPAPVADA ARIQEVALAL LAPLEPVALG VRLLGVTLSS
LGEGDDEMVV TAEQLALAFE