Gene Swit_3556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3556 
Symbol 
ID5199666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3916512 
End bp3917471 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content72% 
IMG OID640583111 
Product3-oxoacyl-[acyl-carrier-protein] synthase III 
Protein accessionYP_001264040 
Protein GI148556458 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.896137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGGG CCGTGGTGAT CGGCACCGGA TCGGCGCTTC CGCGCCGCCA GGTCAGCAAT 
GCCGAGCTCG CCCGGACCGT GGACACCTCG GACGAGTGGA TCGTCGAGCG GACCGGCATC
CGCAACCGCT ACGTCGCCGG CGAGGGCGAG ACGACCTCGA CCCTCGCGAC CGAAGCCGCG
CGCAAGGCGA TCGAGGCGGC GGGGATCGCG CCGTCCGACA TCGGGCTGAT CATCCTGGCG
ACGGCGACGC CCGACCAGAC CTTCCCCGCC TCGGCGACGA TGGTCCAGGC GGCGCTCGGC
ATCGGCGATT GCGTGGCGTT CGACGTGCAG GCGGTCTGTT CGGGCTTCCT CTACGCGCTG
TCGGTGGCCG ACAGCATGAT CCGCGGCGGC TCCGCCACCC ACGCGCTGGT GATCGGCGCG
GAGACGTTCA GCCGCATCCT CGACTGGGAG GACCGGACGA CCTGCGTGCT GTTCGGCGAC
GGCGCCGGCG CGGTGGTGCT CAAGGCCGAG GAGGGCGGCG ATCGCGGCGT GCTCGCGACC
CGGCTCCACG CCGACGGCCG CCATAACCAG CTCCTCTATG TCGACGGCGG CCCGTCGACG
ACCCAGACCG TCGGCAAGCT CCGCATGAAG GGGCAGGAGG TGTTCCGCCA CGCCGTCACC
AACCTCGCCC AGGTGCTGCG CGAGGTGATG GGCGATGCCG GGCTGACCGT CGACGACATC
GACTGGGTGG TGCCGCACCA GGCCAACCGG CGCATCCTCG ACGCCACGGC GCGCAAGCTC
GGCCTGCCCG CCGAGCGGGT GATCGTCACC GTCGACCAGC ATGCCAATAC CTCGGCCGCC
TCGGTGCCGC TGGCGCTCGA CGTCGCGGTT CGCGACGGGC GGATCAAGCC CGGCGATCTG
CTGGTGCTCG AGGCGATGGG CGGCGGCTTC ACCTGGGGCG CCGCGGCGAT TCGCTATTGA
 
Protein sequence
MRRAVVIGTG SALPRRQVSN AELARTVDTS DEWIVERTGI RNRYVAGEGE TTSTLATEAA 
RKAIEAAGIA PSDIGLIILA TATPDQTFPA SATMVQAALG IGDCVAFDVQ AVCSGFLYAL
SVADSMIRGG SATHALVIGA ETFSRILDWE DRTTCVLFGD GAGAVVLKAE EGGDRGVLAT
RLHADGRHNQ LLYVDGGPST TQTVGKLRMK GQEVFRHAVT NLAQVLREVM GDAGLTVDDI
DWVVPHQANR RILDATARKL GLPAERVIVT VDQHANTSAA SVPLALDVAV RDGRIKPGDL
LVLEAMGGGF TWGAAAIRY