Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3556 |
Symbol | |
ID | 5199666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3916512 |
End bp | 3917471 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640583111 |
Product | 3-oxoacyl-[acyl-carrier-protein] synthase III |
Protein accession | YP_001264040 |
Protein GI | 148556458 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.896137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCGGG CCGTGGTGAT CGGCACCGGA TCGGCGCTTC CGCGCCGCCA GGTCAGCAAT GCCGAGCTCG CCCGGACCGT GGACACCTCG GACGAGTGGA TCGTCGAGCG GACCGGCATC CGCAACCGCT ACGTCGCCGG CGAGGGCGAG ACGACCTCGA CCCTCGCGAC CGAAGCCGCG CGCAAGGCGA TCGAGGCGGC GGGGATCGCG CCGTCCGACA TCGGGCTGAT CATCCTGGCG ACGGCGACGC CCGACCAGAC CTTCCCCGCC TCGGCGACGA TGGTCCAGGC GGCGCTCGGC ATCGGCGATT GCGTGGCGTT CGACGTGCAG GCGGTCTGTT CGGGCTTCCT CTACGCGCTG TCGGTGGCCG ACAGCATGAT CCGCGGCGGC TCCGCCACCC ACGCGCTGGT GATCGGCGCG GAGACGTTCA GCCGCATCCT CGACTGGGAG GACCGGACGA CCTGCGTGCT GTTCGGCGAC GGCGCCGGCG CGGTGGTGCT CAAGGCCGAG GAGGGCGGCG ATCGCGGCGT GCTCGCGACC CGGCTCCACG CCGACGGCCG CCATAACCAG CTCCTCTATG TCGACGGCGG CCCGTCGACG ACCCAGACCG TCGGCAAGCT CCGCATGAAG GGGCAGGAGG TGTTCCGCCA CGCCGTCACC AACCTCGCCC AGGTGCTGCG CGAGGTGATG GGCGATGCCG GGCTGACCGT CGACGACATC GACTGGGTGG TGCCGCACCA GGCCAACCGG CGCATCCTCG ACGCCACGGC GCGCAAGCTC GGCCTGCCCG CCGAGCGGGT GATCGTCACC GTCGACCAGC ATGCCAATAC CTCGGCCGCC TCGGTGCCGC TGGCGCTCGA CGTCGCGGTT CGCGACGGGC GGATCAAGCC CGGCGATCTG CTGGTGCTCG AGGCGATGGG CGGCGGCTTC ACCTGGGGCG CCGCGGCGAT TCGCTATTGA
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Protein sequence | MRRAVVIGTG SALPRRQVSN AELARTVDTS DEWIVERTGI RNRYVAGEGE TTSTLATEAA RKAIEAAGIA PSDIGLIILA TATPDQTFPA SATMVQAALG IGDCVAFDVQ AVCSGFLYAL SVADSMIRGG SATHALVIGA ETFSRILDWE DRTTCVLFGD GAGAVVLKAE EGGDRGVLAT RLHADGRHNQ LLYVDGGPST TQTVGKLRMK GQEVFRHAVT NLAQVLREVM GDAGLTVDDI DWVVPHQANR RILDATARKL GLPAERVIVT VDQHANTSAA SVPLALDVAV RDGRIKPGDL LVLEAMGGGF TWGAAAIRY
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