Gene Swit_3528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3528 
Symbol 
ID5197301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3885239 
End bp3885580 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content69% 
IMG OID640583083 
ProductDNA-directed RNA polymerase subunit omega 
Protein accessionYP_001264012 
Protein GI148556430 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.408605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.17098 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCG TCACCGTCGA GGATTGCGTC GACAAGATTT CCAACCGGTT CGACCTGGTG 
CTGATGGCTG CCCAGCGGGC GCGCCAGATC TCGGGCGGGG CCGAACTGAC GATCGATCGC
GACCGCGACA AGAATCCGGT CGTCGCCCTG CGCGAGATCG CCGAGCAGAC CGTCACGCCG
GAGGAGCTGC ACGAGGCGGT CGTCTCGACG CTGCAGCGCG TCCGCGTCGA CGACGACGAT
GCGCCGGACG AGATCGGCTC GCTGGCCGCG TCGGCCGAGG CGCTGCGCCT CACCGCCGCC
GCTCCGCCGC GCAACCAGAA TATCGGCGGC GACTACGAAT AA
 
Protein sequence
MARVTVEDCV DKISNRFDLV LMAAQRARQI SGGAELTIDR DRDKNPVVAL REIAEQTVTP 
EELHEAVVST LQRVRVDDDD APDEIGSLAA SAEALRLTAA APPRNQNIGG DYE