| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3527 |
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| Symbol | |
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| ID | 5197300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3882968 |
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| End bp | 3885073 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640583082 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001264011 |
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| Protein GI | 148556429 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.982777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.148068 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGAGAC AATATGAACT CGTCGATCGG GTGTTGAGCT ACGATCCGGA CGCGGATGAG
GCCCTGCTCA ACCGCGCCTA TGTGTTTTCG ATGCAGGCGC ATGGCAGCCA GAAGCGCGCC
AGCGGCGATC CCTATTTCAG CCACCCGATC GAGGTGGCGG GCATCCTGAC CGACCTCCAG
CTCGACGACG AGACGATCGC CACCGCGATC CTCCACGACA CGATCGAGGA CACGGTCGCC
ACGCCCGAGC AGATCGAGAA GAGCTTCGGC CCCTCGGTCG CGCGGCTGGT CGACGGCGTC
ACCAAGCTGT CGAAGATCGA GGCGCAGACC GAGAATGAGC GCGCCGCCGA GAATCTGCGC
AAATTCCTGC TCGCCATGTC GAGCGACATC CGCGTGCTGC TGGTCAAGCT GGCCGACCGG
CTGCACAACA TGCGCACGCT CCATCACATC CCGTCGGAGC AGAAGCGCCG CCGCATCGCG
CGCGAGACGA TGGACATCTA CGCCCCGCTC GCCGAGCGGA TCGGCATGTA CGAGTTCATG
CGCGAGATGC AGACGCTCGC CTTCCAGCAG CTCGAACCCG ACGCCTATGC GTCGATCACC
AAGCGGCTCA AGCAGCTCAA CGAGGGCGGC GGCGACCTGA TCTCGCGGAT CAGCTCGGGC
CTGCGCCTCC AGCTCGGCCG CGCCGGCGTC CAGGCCGAGA TCCAGGGGCG CGAGAAGCAC
CCCTATTCGA TCTGGAAGAA GATGGCCGAA CGGCACATCA GCTTCGAGCA GCTCTCCGAC
GTGATGGCGT TCCGCGTGAT CGTCGCCGAC ATCGACGAAT GCTACAAGGC GCTGGGCGTG
CTCCACCGCC GCTGGCCGAT GGTGCCGGGC CGCTTCAAGG ACTATATCTC GACCCCGAAG
CGCAACGGCT ACCGCTCGCT CCACACCTCG ATCATCCATT CGGAGAAGAT GCGCATCGAG
GTGCAGATCC GCACCGAGGA GATGCACGCC GAGGCCGAAT ATGGCCTGGC CGCGCACTGG
GCGTACAAGC AGGGCAAGCC GGCCGGCGAG CAGGGCAACC ACAGCTGGAT TCGCGACCTG
GTCGACATCC TCGAACATGC CGACAATCCG GAGGAGCTGC TCGAGCATAC CCGGATGGCG
ATGTACCAGG ACCGGATCTT CGCCTTCAGC CCGACCGGCG AGCTGATCCA GCTCCCCAAG
GGATCGACCG CGATCGACTT CGCCTATGCC GTTCACACCG ATGTCGGCGA CACCACGGTC
GGCGCCAAGA TCAACGGCCG GGTGGTGCCG CTGCGCACCC TGATCGAGAA TGGCGACCAG
GTGCAGATCC TCCGCTCGAA GGCGCAGGAG CCGCAGGTCG AGTGGCTGAC CTTCGCCTTC
ACCGGCAAGG CGCGCGCCGC GATCCGCCGC TTCGTCCGCC ACAAGGAGCG CGAGGAGACG
ATCGCGCTCG GCCGCAAATT CTACGACGAG ATCGTCCGCC GCATCCCCGC GCCGCTCGGC
CCCGAGGCGC TGCCCGAGGC GCTCAAGCGG CTCAAGCTTC CCGACGAGGA AGCGCTGATG
GAGTCGATCG CGCGCAAGCT GATCGACGAC GCCACGGTGA TGGACGCGCT GATGCCGGGC
AGCGCCGAGA AGGCCGGCGT CAAGCGGCGC GAGACCGGGC AGCGCGAGGC GATCTCGATG
AAGGGGCTGA CCCCCGGCGT CGCCTTCCAG CTCGCCGAAT GCTGCAACCC GGTGCCCGGC
GACCGCATCA TCGGCGTGCG CCGGCCCGAC CATCCGGTCG AGGTCCACAC GATCGACTGC
AGCAGGCTGG CCGAGCAGCA GGATGCCGAC TGGGTCGACC TCGCCTGGGG CGACGGATCG
GACGGCGGCA CCGCGCGGCT GACCGTGATC GTCAAGAACG AGCCGGGCGC GCTCGGCATC
ATGTCGGGCA TCCTCGGCGC GCACCACGCC AACATCGTCA ACCTGTCGCT GTCGCACCGC
GACGCGGCGT TCCACACCTA TGACGTGACG ATCGAGGTCC ACGACGTCCA GCACCTGATG
AAGATCATCG CCGCCCTGCG CGCCGCCGAC GCGGTCTCGC AGGCGGAACG CACCCCGGCG
GGCTGA
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| Protein sequence | MLRQYELVDR VLSYDPDADE ALLNRAYVFS MQAHGSQKRA SGDPYFSHPI EVAGILTDLQ
LDDETIATAI LHDTIEDTVA TPEQIEKSFG PSVARLVDGV TKLSKIEAQT ENERAAENLR
KFLLAMSSDI RVLLVKLADR LHNMRTLHHI PSEQKRRRIA RETMDIYAPL AERIGMYEFM
REMQTLAFQQ LEPDAYASIT KRLKQLNEGG GDLISRISSG LRLQLGRAGV QAEIQGREKH
PYSIWKKMAE RHISFEQLSD VMAFRVIVAD IDECYKALGV LHRRWPMVPG RFKDYISTPK
RNGYRSLHTS IIHSEKMRIE VQIRTEEMHA EAEYGLAAHW AYKQGKPAGE QGNHSWIRDL
VDILEHADNP EELLEHTRMA MYQDRIFAFS PTGELIQLPK GSTAIDFAYA VHTDVGDTTV
GAKINGRVVP LRTLIENGDQ VQILRSKAQE PQVEWLTFAF TGKARAAIRR FVRHKEREET
IALGRKFYDE IVRRIPAPLG PEALPEALKR LKLPDEEALM ESIARKLIDD ATVMDALMPG
SAEKAGVKRR ETGQREAISM KGLTPGVAFQ LAECCNPVPG DRIIGVRRPD HPVEVHTIDC
SRLAEQQDAD WVDLAWGDGS DGGTARLTVI VKNEPGALGI MSGILGAHHA NIVNLSLSHR
DAAFHTYDVT IEVHDVQHLM KIIAALRAAD AVSQAERTPA G
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